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… Dr. Grigoriev engaged thousands of researchers in genome projects and organized numerous genomics workshops. … et al (2021) PhycoCosm, a comparative algal genomics resource.  Nucleic Acids Res. 49(D1):D1004-D1011 Swift et al … cylindrus.   Nature. 541(7638):536-540. Riley et al (2016) Comparative genomics of biotechnologically important …

… JGI Plant Gene Atlas is a huge updateable transcriptome resource spanning diverse plant species. It was developed to … Centralized databases with large-scale transcriptome projects such as Expression Atlas and PPRD could help with … keep updating the Gene Atlas with curated datasets from CSP projects and aim to improve plant gene function …

… bioeconomy, including, potentially, methane as an energy source.  Until recently, our understanding of these … (FICUS) with the Environmental Molecular Sciences Lab (EMSL), another DOE user facility located at Pacific … support from the JGI. First they were able to identify the potential for methanogenesis, but questions remained …

… Laboratory, have collaborated with global researchers on projects related to understanding how the interactions … in developing and managing public viral genomics resources such as analytical tools and data repositories to two … to easily analyze viral genomes. This includes (i) classifying viruses into groups that can be compared across …

… worked with the JGI through a Community Science Program (CSP) proposal, and Rambo’s research builds on that. “The purpose of this CSP is to better understand methane cycling in mangrove … his time with the JGI has shaped his post-graduate school plans. “The SCGSR gave me some great insight into my career …

… revisited a number of notable achievements that showcase our collaborations and capabilities to enable great science … been cited more than 5,400 times, including a number of projects that point to the potential of seed oils as … ASR in this JGIota, a Genome Insider podcast minisode.)  In 2016, the JGI accepted a proposal from Sebastien Duplessis …

… genomic information into biological function. Through our CSP Functional Genomics call , we look for projects that will leverage the JGI’s DNA synthesis and …

… buck. The research team reports that transferring just four genes encoding these enzymes to another plant, such as  … harnessed gene expression data from these lines to identify genes associated with zealexin synthesis. The researchers … Science Program . And the work is part of a  larger CSP Functional Genomics proposal to understand terpene  …

… JGI and the Environmental Molecular Sciences Laboratory (EMSL) co-hosted a JGI Engagement: Accessing Resources at Multiple DOE User Facilities with a Single … scientists with accepted proposals free access to their resources. … working to address some of the most pressing challenges of our time. For more information, please visit  …

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… approved through the annual  Community Science Program (CSP) call of the U.S. Department of Energy (DOE) Joint … capacity. Additionally, the call recommended including plans to analyze and distribute data through the  DOE Systems Knowledgebase (KBase) , a free, open source data science platform that allows users to explore …

… analysis of microbial, fungal, and plant research projects.  More recently, these long-reads have been applied … deeply are metagenomes sequenced? A:  For the next call ( CSP New Investigator ), up to 4 long-reads (PacBio) … PacBio reads (i.e., reads with very low error rate), so our pipeline performs long-reads-only assemblies and not …