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Informatics Advisory Committee
The IAC is chartered by the JGI Chief Informatics Officer (CIO) and reports to the JGI Director. The IAC is chartered to render advice, … the effective management and strategic objectives for the JGI’s data science, informatics and information technology …
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Nigel Mouncey
… and today, focuses on continuing to build and position JGI as a leading integrative genome science user facility. … on the Leadership Team of the National Microbiome Data Collaborative and served as President of the Society for … with 824 Isolate Reference Genomes. Cell Genomics 2: 100213Nayfach S et al. 2021. A genomic catalog of Earth’s …
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Here, There and Everywhere: Large and Giant Viruses Abound Globally
JGI-led team significantly expands the global diversity of … giant. The genomes of giant viruses are on the order of 100 times the size of what has typically been associated … Science User Facility located at Lawrence Berkeley National Laboratory (Berkeley Lab) uncovered a broad diversity of …
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Streamlining Regulon Identification in Bacteria
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National Laboratory (Berkeley Lab). Transcription factors control … addressed in the study were found to control more than 100 genes, one of which was directly characterized by …
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CSP New Investigator Call
… is for investigators and research initiatives new to the JGI. Projects must be independent of ongoing JGI proposals, and lead PIs cannot have been lead PI on any … the JGI’s sample requirements . Samples that are not available in a timely manner will delay processing, while …
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From Sample Shipments to Sequences – A Tour of the JGI’s Sequencing Pipeline
Every year, the JGI sequences around 35,000 samples — from plants, algae, … from afar, without ever hearing much about the sequencing lab. So today, Chris Daum walks through the JGI’s sequencing pipeline, where there are freezers with …
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Science Programs
The JGI’s Science Programs offer support to users and their research efforts.  JGI scientists lend their expertise to enhance the … for them. Their concerted efforts help maximize the JGI’s impact in advancing both user science and the DOE …
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Jeremy Schmutz
For the past 13 years, Mr. Schmutz has directed the JGI Plant Program, focusing on the organization of community driven science for JGI Plant Flagship Genomes and DOE relevant cellulosic … produced by the DOE Joint Genome Institute and the collaborative projects funded through the CSP program. In …
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Igor Grigoriev
Institute, a Senior Scientist at Lawrence Berkeley National Laboratory, and an Adjunct Professor of Plant and Microbial … genomes, from protists to plants. In 2009, he launched the JGI Fungal Genomics program which resulted in over 2500 … algal genomics resource.  Nucleic Acids Res. 49(D1):D1004-D1011 Swift et al (2021) Anaerobic gut fungi are an …
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Logos and Templates
The JGI Style Guide offers tips on JGI logo usage - please follow these guidelines. Logos JGI … or need logos or templates in a format not currently available here, contact Massie Ballon ([email protected]).   …
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User Executive Committee Charter
The JGI User Executive Committee (UEC) represents the JGI user community and is responsible for providing input … scientific community and promotes communication and collaboration within the user community. UEC responsibilities …
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Sequencing Technologies
… sequencing to enable biological discovery by the JGI and external DOE users. Adopting the latest  sequencing technologies has allowed the JGI to increase sequencing output while significantly … hand with the Project Management Office to help ensure the JGI’s genomic capabilities are ready and applicable to …
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