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An Integrated Dataset to Understand Ecosystem Interaction
… tree and soil dataset for understanding the dynamic relationship between poplar trees and their microbial partners. … they are, a recent data set  outlined in  Scientific Data connects molecular features to large ecosystem-level … how different elements of the ecosystem interact and respond to changes in the environment. The Impact Dubbed “the” …
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Introducing New Members of the JGI User Executive Committee
Committee (UEC) – Jack Gilbert, Ashley Shade, and Jason Stajich! They join six other JGI users already serving on the UEC – go here to view the full roster of members. … Centre National de la Recherche Scientifique (CNRS) in October and maintains a lab at Michigan State University. She …
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Game On: High School Students Drive Everglades Metagenomics Study
… a member of JGI’s Sample Management Group, attended a conference in Florida to discuss a JGI pilot project … in the Florida Everglades to help train the next generation of scientists. She shares her thoughts about the … made coring devices, then planned and collected from 4 sites with 5 replicates. They extracted the DNA from the …
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JGI@25: Roots of a Mutualist Relationship
In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements that showcase our collaborations and capabilities to enable great science that will help …
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Genome size, cell size, and the evolution of enucleated erythrocytes in attenuate salamanders
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Kjiersten Fagnan
… with JGI in 2012 as a NERSC bioinformatics computing consultant, after completing a petascale postdoctoral fellowship at NERSC and LBNL’s Computational Research Division.. As a postdoc, her research focused on stable and …
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JGI@25: Expanding Metagenomics to Capture Viral Diversity
In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements that showcase our … directly from samples sidesteps these challenges, since it doesn’t require this kind of lab culture. Beginning in the …
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Giant Bacteria Found in Guadeloupe Mangroves Challenge Traditional Concepts
… 5,000 times bigger than most bacteria. To put it into context, it would be like a human encountering another human … for carbon cycling . If you look at the space that they occupy on a global scale, it’s less than 1% of the coastal … the Caribbean,” Volland said. “In terms of metabolism, it does chemosynthesis, which is a process analogous to …
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Conserved unique peptide patterns (CUPP) online platform 2.0: implementation of +1000 JGI fungal genomes.
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JGI & KBase at PAG XXVII
The Plant and Animal Genome XXVII Conference (PAG) takes place January 12-16, 2019, in San … a list of talks relevant to JGI science at PAG XXVII. On January 14, JGI Plant Program head Jeremy Schmutz and  KBase Co-PI Bob Cottingham host a  workshop on DOE Biological and Environmental Research (BER) Plant …
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Zhong Wang
Research in the Analysis R&D group focuses on developing new bioinformatics solutions to support JGI in adopting new genomics technologies, … enabling data-driven science. This is a group of computational biologists, bioinformaticians, computer scientists and …
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Approved Proposals
… (CSP) as well as the Facilities Integrating Collaborations for User Science (FICUS) program.  …
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