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In Hot Spring Microbial Mat, Viruses Ride “Piggyback”
… For the first time, a team has comprehensively described host-virus … kill outright, replicating so thoroughly that they lyse the cell — a process called lytic infection. But some viruses … host indefinitely. Now, in studying a microbial mat from Cone Pool in Mono County, California, scientists have used …
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Frederik Schulz
… Dr. Frederik Schulz joined the DOE Joint Genome Institute in 2016 and is leading the New Lineages of Life Group. His … multi-omics (metagenomics, metatranscriptomics, single cell genomics and phylogenomics) and machine learning to … protists. These approaches enable novel insights into the diversity and important ecological roles of microeukaryotes …
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2025 NeLLi Symposium
… and postdocs (including LBNL students and postdocs): $250      Hosted by the DOE Joint Genome Institute, the … Tree of Life and latest discoveries toward the evolution of cellular complexity and microbial symbiosis.  This is a … define, quantify, and functionally characterize microbial diversity. The Symposium will also focus on experimental …
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Team Science Reveals Important Protein in Poplar
… Described as the “DOE Tree,” poplar is considered one of the  Flagship Plants for the U.S. Department of … in   iron deficiency response, formation of secondary cell walls (biosynthesis), and integrating molecules that … was overexpressed, those plants had stunted growth, weaker cell walls, and were less resistant to disease compared to …
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An Integrated Dataset to Understand Ecosystem Interaction
… features to large ecosystem-level processes for the first time. By collecting data from 27 different poplar ( Populus trichocarpa ) trees, as well … bioenergy tree, poplars are known for their genetic diversity. They hold economic value as both biofuel … the U.S. Department of Energy under contract DE-AC05-00OR22725. The work ( https://doi.org/10.46936/10.25585/60000017 …
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How to Submit Sequencing Samples
… at the JGI. The quality of the starting material is one of the greatest predictors of a successful sequencing … Weight DNA extraction and quality control (from PacBio) 2) Review guidelines detailing quantity and quality … must also include a completed Export Certification Form . 2) Obtain Approval for Shipping Before approval to ship is …
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DAP-seq Drives Robust Mapping of Gene Regulation
… a single experiment — and integrated these data with single-cell gene expression maps. Together, the scale of data … ability to chart regulatory networks across evolutionary time and diverse plant lineages. Aligning with U.S. … adaptation. “You learn a lot more than you would from each one individually,” Baumgart added. “By combining these data, …
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Draft genome sequence of Actinotignum schaalii DSM 15541T: Genetic insights into the lifestyle, cell fitness and virulence
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Phylogenomic Analyses Indicate that Early Fungi Evolved Digesting Cell Walls of Algal Ancestors of Land Plants
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Cell Wall Compositions of Sorghum bicolor Leaves and Roots Remain Relatively Constant Under Drought Conditions
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Cell Extracts from Bacteria and Yeast Retain Metabolic Activity after Extended Storage and Repeated Thawing
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2021 JGI Proposal Call Brings New Investigators into Community Science Program
… resulting from 95 letters of intent. For the first time, 63 percent of the accepted proposals come from … of Rutgers University is interested in understanding how unicellular red algae (Cyanidiophyceae) have adapted thrive in … more than 10,000 undergraduate students each year. Brian Looney of Duke University is interested in understanding which …
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