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Elviz – exploration of metagenome assemblies with an interactive visualization tool
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Multifunctional cellulases are potent, versatile tools for a renewable bioeconomy
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Expanding Virophage Diversity
By mining more than 14,000 publicly available metagenomic datasets in JGI’s  Integrated Microbial Genomes & Microbiomes (IMG/M) data suite—which includes  IMG/VR (for Virus)—for the … & Applications (VEGA) Symposium. The work also used resources of the National Energy Research Scientific …
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A Complex Confection Decoded: Sugarcane Reference Genome
… present in R570 but shows the genomic effects of breeding practices that transformed sugarcane into production … The reference genome of R570 is available on the JGI plant data portal,  Phytozome .   … The work (proposal: …
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MicroSyn: A user friendly tool for detection of microsynteny in a gene family
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Olpidium, The Key to the Origin of Terrestrial Fungi
… of their well-designed sampling and analysis of their data at the time. Following the publication of their paper … Canada at Summerland BC aimed to generate whole genome data of Olpidium. This required an enormous amount of effort … genome and transcriptome data were generated, bioinformatic tools for binning metagenome data involved with mainly …
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Natural Prodcast Episode 7: Ben Shen
… notes, and I’ll put up some structures and link to some resources you can use to get caught up, if you’re not … so everybody, readers of the library, can come to our databases and look for the specific information they are … the genomics, with the bioinformatics and with the bigger data, another area I see a great potential will be machine …
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Accelerating Metagenomics Discoveries with Deep Learning
… an online workshop to harness deep learning for metagenomic data.  Metagenomic data, or DNA sequencing data gathered … between JGI and scientists in the Computational Resources Division (CRD), in order to create more useful tools for the bioinformatics community. Other work presented …
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Single Cell Research Group
… high value to establish models and hypotheses, experimental data is critical to further test such hypotheses. In …
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ActinoBase: tools and protocols for researchers working on Streptomyces and other filamentous actinobacteria
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Bioinformatics Analysis Tools for Studying Microbiomes at the DOE Joint Genome Institute
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Community Science Program
… ranked proposal list, along with a recommendation from JGI management, is then forwarded to DOE for final approval. …
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