Results

MIxS-HCR: a MIxS extension defining a minimal information standard for sequence data from environments pertaining to hydrocarbon resources
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A Community Resource for Secondary Metabolite Researchers
… gene clusters (BGCs.) As reported in the recent Database issue of the journal Nucleic Acids Research , … using multiple commonly used sequence analysis tools is a means of expediting BGC and biosynthesis … a DOE Office of Science User Facility, is supported by the Office of Science of the U.S. Department of …
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Non-contiguous finished genome sequence and contextual data of the filamentous soil bacterium Ktedonobacter racemifer type strain (SOSP1-21T)
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Nigel Mouncey
… is also on the Leadership Team of the National Microbiome Data Collaborative and served as President of the Society … the Joint Genome Institute at national and international forums. Breaking the Wall of Environmental Genomics … … of solvent-producing Clostridium species. Scientific Data. 11 Hahnke, R. L. et al. 2022. Expanding the Genomic …
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Genome Sequence of the Alkaline-Tolerant Cellulomonas sp. Strain FA1
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Transcriptomic Data Sets for Zymomonas mobilis 2032 during Fermentation of Ammonia Fiber Expansion (AFEX)-Pretreated Corn Stover and Switchgrass Hydrolysates
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16S rRNA Gene Amplicon Sequencing Data from Flooded Rice Paddy Mesocosms Treated with Different Silicon-Rich Soil Amendments
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An Integrated Dataset to Understand Ecosystem Interaction
Research yields a comprehensive tree and soil dataset for understanding the dynamic relationship between … how ecosystems work and how healthy they are, a recent data set  outlined in  Scientific Data connects molecular … a DOE Office of Science User Facility, is supported by the Office of Science of the U.S. Department of …
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Polar Phytoplankton Need Zinc to Cope with the Cold
… his team then linked those species-level observations with data on microalgal communities across different ocean … from pole to pole, using metatranscriptome and metagenome data from the JGI. With multiple threads of evidence showing … which explores genomics of algal diversity and biology to support basic science as well as bioenergy and …
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A Complex Confection Decoded: Sugarcane Reference Genome
The reference genome of R570 is available on the JGI plant data portal,  Phytozome .   … The work (proposal: … User Facility and the DOE Joint BioEnergy Institute, are supported by the Office of Science of the USA Department of … National Laboratory. The work conducted at CIRAD was supported by the International Consortium for Sugarcane …
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A One-Stop Shop for Analyzing Algal Genomes
The PhycoCosm data portal allows anyone to freely investigate the genes of … more than 100 algal genomes, compare them, and visualize supporting experimental data. The Impact Algae are important … in algae. PhycoCosm joins other online data portals and tools created by JGI researchers, including the Integrated …
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Applying Viral Genomics Expertise to Understanding the Human Virome
JGI researchers lend expertise to develop tools and data hub for NIH program. While the microbes in, … understand their roles and potential impacts. The work is supported by NIH Common Fund grant 1U01DE034196-01. The JGI …
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