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Viruses Reprogram Cells into Different Virocells
… uninfected cells. Duhaime and Sullivan are co-corresponding authors, while the study’s lead author is Cristina … U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … Research and operated under Contract Numbers DE-AC02–05CH11231 (JGI) and DE-AC05–76RL01830 (EMSL). This work was funded …
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IMG Group
The IMG group owns and maintains integral components of JGI’s production workflow, and is responsible for the … speciation events within existing species. Within the JGI’s production pipeline, ANI is used to ascertain the … control within IMG. While ANI is integrated within IMG, ani.jgi.doe.gov serves the current data. … The mission of the …
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Tracking the Origins of Methane-Producing Microbes
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science user facility, report the … archaea. The Quake lab had previously collaborated with the JGI on a proposal using this approach through the Emerging … observed, but to the “TACK” superphylum,” said study first author Bojk Berghuis. “This provided us with genetic …
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Tour the IGB
… zoom in and out. 1st floor 2nd floor 3rd and 4th Floors The JGI mural on the 3rd floor whimsically references dozens of iconic JGI contributions to advancing the frontiers of …
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University of California, Merced Internship Program
Merced graduate student summer research experience at the JGI, the Genomics Internship Program soon expanded to … students have contributed to the research of numerous JGI scientists. Interns say their experiences allowed them …
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Natural Prodcast
… to medicine, the environment, and human health. As the JGI acts on its goals in — and builds out its capabilities … field about current and future developments, and how the JGI can be part of that space.   …
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The More the Merrier: Making the Case for Plant Pan-genomes
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … of the Universidad de Zaragoza, one of the paper’s senior authors. “It offers us the possibility to explore … Functional Genomics program at the JGI and a senior author on the paper. “The assumption that all the genes in a …
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A Natural Mechanism Can Turbocharge Viral Evolution
… the US Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science user facility located at … dice. There’s some evidence to support the idea. Study coauthor Stephen Nayfach, a JGI bioinformatics research … U.S. Department of Energy under contract no. DE-AC02-05CH11231. This research used resources of the National Energy …
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Outreach Stories
Interested in reading more JGI intern and mentor success stories? Read more below. …
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Enlarging Windows into Understanding Gene Functions
JGI innovates protocol revealing how genetic variations in … 2021 in Nature Methods , JGI researchers led by co-first authors Leo Baumgart and Juna Lee developed two approaches … transcription factor of interest. Nature Methods paper coauthor Lee did the initial development of a streamlined …
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Tapping the treasure trove of atypical phages
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Igor Grigoriev
… genomes, from protists to plants. In 2009, he launched the JGI Fungal Genomics program which resulted in over 2500 fungal genomes in the JGI MycoCosm portal. In 2018, he launched scale-up of algal … origin of enzymatic lignin decomposition reconstructed from 31 fungal genomes.  Science.  2012;336: 1715-1719. Berka RM …
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