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Tracing the Evolution of Shiitake Mushrooms
… New genomes highlight the diversity of white rot fungi in the genus Lentinula   The Science Shiitake … — the shii tree, a Japanese relative of the oak. These fungi are part of the genus Lentinula, which have evolved to … those samples, this study also tracks the enzymes these fungi use to break down wood, and compares genetic diversity …
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The fungus that made itself at home
… so destructive in houses. A study involving six brown rot fungi reveals the genomic changes Serpula lacrymans has … User Facility, compared the genomes of two strains of fungi Serpula lacrymans – var. lacrymans from Europe and … or confrontation experiments, involving these three Serpula fungi against three other brown rot fungi to see how the …
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Understanding Wildfire Recovery, Starting in Soil
… Within the soil, a microbiome of bacteria, viruses and fungi process carbon and nitrogen, paving the way for future … trees and soils, targeting helpful bacteria, viruses and fungi. Overall, better understanding of a recovering soil … returned to the forest within this timeframe, namely, ectomycorrhizal fungi species that can promote tree …
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Computationally Classifying Fungal Lifestyles
… genomes of Dothideomycetes, the largest class of fungi, by lifestyles. The machine “learned” to identify data … species.  The Impact The class  Dothideomycetes includes fungi that obtain nutrients from decaying organic matter … Dothideomycetes could provide more insights into how these fungi have adapted to stress and host specificity, …
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Natural Prodcast Episode 6: Marc Chevrette
… metabolomics, and natural products in plants, fungi, and microorganisms. If you want to collaborate, let …
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Natural Prodcast Episode 9: Roger Linington
… metabolomics, and natural products in plants, fungi, and microorganisms. If you want to collaborate, let …
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Natural Prodcast Episode 13: Francisco Barona Goméz
… metabolomics, and natural products in plants, fungi, and microorganisms. If you want to collaborate, let …
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Natural Prodcast Episode 15: Katherine Duncan
… metabolomics, and natural products in plants, fungi, and microorganisms. If you want to collaborate, let …
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JGI@25: Using Team Science to Build Communities Around Data
… 1000 fungal genomes to create two reference genomes for all fungi families — essentially, the foundation for an … Riverside would focus on broad sampling of early diverging fungi, and Francis Martin of the French National Institute … on in-depth exploration of ecology-related groups of fungi. The 1KFG project has brought together over 400 …
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Webinar: MycoCosm Tutorial
… to be proposed for genome sequencing, or only “true fungi”? A(nswer): Our focus is on fungi, algae, plants, and the microbial world but we also … or manual curation they are searchable. For model fungi, not sequenced by JGI and adopted by large research …
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Leo Baumgart
… wide range of JGI user science projects spanning bacteria, fungi, and plants. His team is also developing single-nuclei …
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From Sample Shipments to Sequences – A Tour of the JGI’s Sequencing Pipeline
… 35,000 samples — from plants, algae, bacteria, archaea, fungi, viruses — to support scientists around the world. …
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