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The integrated microbial genomes (IMG) system in 2007: data content and analysis tool extensions
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2021 JGI Proposal Call Brings New Investigators into Community Science Program
… (CSP) call of the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … with 600 instructors worldwide who work with more than 10,000 undergraduate students each year. Brian Looney of … which species of mycorrhizal fungi are important for poplar plant health, in part to learn how these species can …
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Synthesis
The Joint Genome Institute's DNA Synthesis Platform capabilities …
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Here, There and Everywhere: Large and Giant Viruses Abound Globally
… archaea and eukaryotes, and they range in particle and genome size from small, to large and even giant. The genomes of giant viruses are on the order of 100 times the size of what has typically been associated … filter the data for the major capsid protein (MCP) to identify NCLDV viruses. JGI researchers previously applied this …
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FICUS Overview
… feasibility and readiness to begin work.  During scientific peer review, proposals are evaluated and placed in …
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JGI@25: Fueling Investigation into Methane-Making Microbes
In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable … as well as efficient engineering of biofuels. Since 2010, the JGI has partnered with researchers around the world to map out genomes of rumen microbes. In 2018, through a JGI Community …
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JGI@25: Building a Better Bean
In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable … of the University of Georgia sequenced and analyzed the genome of the common bean. That work was published online … common bean’s nutritional value, providing anywhere from 10-30% of daily protein requirements. It is also an …
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JGI Launches Latest Strategic Plan
For the Joint Genome Institute, the end of 2018 was marked by a … Basepairs — A Vision for Integrative and Collaborative Genome Science , the culmination of an eight-month intensive … Maxon, Biosciences Associate Laboratory Director, of the 100-page document with over 200 actionable milestones. JGI …
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Natural Prodcast Episode 2: The Primer, Part 2
… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the … We are still in – not an early stage. I think we can identify most secondary metabolism pathways now, but there’s … and you can see that different Frankia have different size genomes depending on what kinds of plants, and what kinds of …
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Workforce Development & Education Outreach
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FICUS
… the scope of the call.  Letters are reviewed by scientific staff of the participating User Facilities, as well as … feasibility and readiness to begin work. During scientific peer review, proposals are evaluated and placed in … Tanja Woyke, Deputy for User Programs. Technical and Scientific Leads will also be available to answer any questions …
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A Grass Model to Help Improve Giant Miscanthus
… of polyploidy and perenniality. The Science A reference genome sequence and genomic toolkit for the perennial grass  … Miscanthus sinensis has been published. Analysis of the genome sequence also provides insights into how the multiple … times and in different parts of the plant, the team identified genes that may regulate nutrient transport to and …
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