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Jeremy Schmutz
… 19. Following the completion of the human genome project in 2003, he developed sequencing, assembly, and improvement … IL … Healey, A.L., Garsmeur, O., Lovell, J.T. et al.  2024.The complex polyploid genome architecture of sugarcane. …
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Jinghua Jenny Huang
… and visualization of large amount isolate genomic and metagenomic data stored in Oracle databases, Berkeley DB and …
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2023 Progress Report
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Petra Byl
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Neha Varghese
… to enable analysis and interpretation of genomic and metagenomic data for JGI’s user community. She also provides …
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Ray Turner Completes Last Tour of Lab Duty at JGI
… one constant for the Joint Genome Institute. On July 1, 2020, that all changed. Ray’s vigilant stewardship as JGI’s … co-localization of JGI and KBase at the Integrative Genomics Building (IGB). Said Michael Brandt of Ray, “You … Berkeley National Laboratory, is committed to advancing genomics in support of DOE missions related to clean energy …
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Kjiersten Fagnan
Kjiersten Fagnan began working with JGI in 2012 as a NERSC bioinformatics computing consultant, after … into scalable methods for scientific data analysis. In 2014 Dr. Fagnan became the JGI-NERSC Engagement Lead with a …
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Enlarging Windows into Understanding Gene Functions
Technologies Group. In an article published November 25, 2021 in Nature Methods , JGI researchers led by co-first … bind quickly and efficiently in the genome by adding tagged transcription factors to a genomic DNA library. “It’s … Berkeley National Laboratory, is committed to advancing genomics in support of DOE missions related to clean energy …
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Tina Clarke
Ms. Clarke joined the Lab in 2007 as the Sr. Human Resources Division Partner for the Joint BioEnergy Institute (JBEI) and in 2017 joined the Joint Genome Institute (JGI). Tina serves in … – 3/98, John F. Kennedy University B.S. in Psychology – 6/92, Sonoma State University Berkeley National Laboratory …
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Evolution of a Fungal Gene Expression Regulator
… and fungi run the gamut from mutually beneficial to antagonistic. In fungi, 5mC is often found in transposable … of life, they tracked the evolution of 5mC pathways across 528 species. The researchers found that unlike most flowering … technologies for producing both reference genomes and epigenomics, researchers are unwrapping complex mechanisms of …
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The JGI Data Portal: Improving User Experience
… areas of focus and data and computational needs. Over its 23-year history, JGI has produced more than 13 petabytes of … Google Analytics data, the team noticed that a large percentage of Phytozome users who were seeking to download all the … Berkeley National Laboratory, is committed to advancing genomics in support of DOE missions related to clean energy …
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Tracing the Evolution of Shiitake Mushrooms
… from around the world. By complete sequencing of 24 new mushroom genomes, and assembling genomes from 60 … of Lentinula species.The Lentinula genus diverged roughly 28 million years ago, when the largest mammal … supported by the NSF awards DEB- 1456588 to D.H. and DEB-1442113 to A.R., the Department of Energy award 0000238431 to …
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