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Tomas Tyml
… and genomics to study endosymbiotic associations within microbial eukaryotes. He hopes to broaden our understanding …
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JGI User Executive Committee Expands
… in fungal genetics and evolution, he helps manage the Bacterial-Fungal Interactions Science Focus Area. He has … her institution and Bioenergy Research Centers. Sogin is a microbial ecologist at UC Merced, where her group focuses on … biology tools that can help produce value-added products from these systems. He’s worked with the JGI on various CSP …
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Computationally Classifying Fungal Lifestyles
… Machine learning methods were applied on sequenced fungal genomes to classify gene families. The … class  Dothideomycetes includes fungi that obtain nutrients from decaying organic matter (saprobes), and many plant … (green). (From Haridas S et al.  Studies in Mycology , 2020.) Using whole genome data from newly sequenced genomes, …
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A Collaboration to Improve Plant Genome Annotations Across Species
… – the complete set of RNA molecules transcribed from all the genes within a cell or tissue at a specific … Schmutz is the Plant Program Lead at the JGI. Sarah:  Why is a resource like this important to the field of plant … plants did you all look at? Avinash: We started off with 12 plants, which are JGI Flagship Plants, mostly related to …
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A Complex Confection Decoded: Sugarcane Reference Genome
… to future environmental conditions. Additionally, insights from the genome could help scale sustainable sugarcane … partly enabled by the JGI’s Community Science Program; in 2018, a monoploid reference sequence of sugarcane was published as a step forward in … The work (proposal: https://doi.org/10.46936/10.25585/60001084 and …
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JGI Advisory Committees Code of Conduct
… the trust of our stakeholders. These stakeholders range from scientists to members of the public whose tax dollars …
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Cocultivation of Anaerobic Fungi with Rumen Bacteria Establishes an Antagonistic Relationship
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Occurrence and expression of genes encoding methyl-compound production in rumen bacteria
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SAR11 bacteria linked to ocean anoxia and nitrogen loss
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Potential for Chemolithoautotrophy Among Ubiquitous Bacteria Lineages in the Dark Ocean
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RegPrecise 3.0 – A resource for genome-scale exploration of transcriptional regulation in bacteria
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Major role of nitrite-oxidizing bacteria in dark ocean carbon fixation
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