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iPHoP: A Matchmaker for Phages and their Hosts
… be a specific host the virus has adapted to commandeer. For bacteriophage viruses, these hosts are microbes like … researchers have found more of these viruses than ever before, in all kinds of ecosystems. However, matching these … In particular, it predicted many more likely hosts for viruses in human microbiome samples, reflecting factors …
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Simon Roux Named 2025 ASM Microbiome Data Prize Awardee
… of the Microbiome Data Prize by the American Society for Microbiology (ASM). Roux leads the Viral Genomics group within the JGI Metagenome Program, and coordinates the … award recognizes distinguished research achievements that support open data practices, development of standards and …
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Toward More Efficient Artificial Photosynthesis
… Chloroplast mimic a platform to capture and utilize carbon in a synthetic fixation … A team led by researchers at the Max Planck Institute (MPI) for Terrestrial Microbiology and the University of Bordeaux … at Lawrence Berkeley National Laboratory (Berkeley Lab). Supporting the Erb lab through the CSP Functional Genomics …
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A Cost-Efficient Way to Convert Yeast into a Cell Factory for Hydroxyapatite
… from this biomanufacturing collaboration is available for licensing. The Science In  Nature Communications , … with BER missions to provide the fundamental science to support innovations for bioproduction and advance their … a Laboratory-Directed Research and Development project supported by Berkeley Lab, JGI and Foundry researchers …
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JGI Hosts GPU Hackathon in May
… in graphical processing unit (GPU)-based high-performance computing resources, an upcoming hackathon led by the Oak Ridge Leadership Computing … said JGI Chief Informatics Officer Kjiersten Fagnan of the upcoming event. “The tools we use to process and analyze …
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JGI Announces 2026 New Investigator Portfolio
… find a list of researchers whose proposals were accepted for 2026. With the JGI's resources, these researchers will … across critical sectors, including biological routes for critical minerals recovery, microbial pathways for high-value bioproducts, and plant–microbe interactions …
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Team Science Reveals Important Protein in Poplar
… Knockout experiments showcase potential for engineering bioenergy crops The Science Scientists at … iron, engineered poplar can be used to develop bioproducts for industrial applications. For example, lignin could be used for building materials … This work was supported by the U.S. Department of Energy, Office of …
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Viruses Reprogram Cells into Different Virocells
… it no longer looks or quacks like one, is it still a duck? For a team led by researchers from The Ohio State University … on the global nutrient cycles regulated by their hosts. For example, microbes that capture and store carbon in the … is known about virus-infected microbial cells that are transformed into virocells, and how the outcomes of these …
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Innovative Technology Improves Our Understanding of Bacterial Cell Signaling
… in regulating microbial cellulose production and biofilm formation, which affects a number of environments, including … researchers developed the first chemiluminescent biosensors for measuring cyclic di-GMP in bacteria through work enabled … di-GMP and cellular networks with fluorescent biosensors before, but such sensors require external illumination, making …
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Alabama A&M Interns Access An Abundance of Knowledge
… an internship program to bring students to the JGI for research training experience. Enabled by the DOE RENEW … and I’ll be attending Alabama A&M University this fall for my master’s in plant soil science and my career focus is … just watching and observing your mentor, but also being a support for them and contributing to what they’re trying to …
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JGI Earth Month: Kjiersten Fagnan Reflects on Shelter-in-Place Effects
… on April 25.  On March 17, 2020, a shelter-in-place order for all residents took effect in six San Francisco Bay Area … statewide. In this brief captioned video, JGI Chief Informatics Officer Kjiersten Fagnan reflects on the personal … National Laboratory, is committed to advancing genomics in support of DOE missions related to clean energy generation …
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Engagement Webinar: How to Successfully Apply for a CSP Proposal
… On September 1, JGI held a JGI Engagement: Pro Tips for Successful Community Science Program (CSP) Applications … Tips: Contact us with your questions (jgi-jira+pmosup[email protected]) Carefully read our proposal call description … built. We recommend exploring how KBase (www.kbase.us) can support biological data analysis. It is a free, open source …
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