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… data gathered from whole samples rather than single cells or isolated strains, is easy to generate, but … insights from metagenomic data. In deep learning, a branch of machine learning, data is passed through algorithms … biologist at the US Department of Energy (DOE) Joint Genome Institute (JGI), presented on generating vector …

… A group led by JGI scientists have made strides in improving and applying a method that allows researchers to quickly modify diverse bacterial genomes. In 2019, the JGI’s Yasuo Yoshikuni and his team  … ( CRAGE ). CRAGE enables scientists to insert large pieces of DNA (up to 60 kb) in a single step, directly into the …

… An article summarizing the field of viral metagenomics, authored by JGI … are at fending off the infection, and how long this evolutionary arms race has been going on.  Answering these … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …

… Clarivate Analytics, formerly the IP & Science arm of Thomson Reuters, has released their 2019 list of Highly Cited Researchers , which includes 10 affiliated with the JGI . The 2019 list focused … a long-term project to sequence, annotate and analyze the genomes of more than 300 Aspergillus Go here to learn more …

… [above] Emma Bell, Mallory Choudoir, Sneha Couvillion, Tobin Hammer, Christina Hazard, Rachel Mackelprang, Brook … is eager to work and share our tools with a widening circle of researchers. That’s why twice each year we look for novel … under our Community Science Program .  Below find a list of the second round of researchers accepted for 2023. …

… a wildfire. The Science After a wildfire burns, recovery begins at the forest floor. Within the soil, a microbiome of bacteria, viruses and fungi process carbon and nitrogen, … to health, researchers have taken a look at microbial genomes across a spectrum of burned soils. By connecting …

… The soybean is a crop that could boost biofuels and fertilize fields. So in 2010, the JGI helped publish the original genome sequence for the soybean, Glycine max. With a full …

… Maureen Coleman and Hugh Cross; [Below] Zac Freedman, Martin Jonikas, Lotus Lofgren, Fumito Maruyama, Lauren Stadler, Tingting Xiang and … the research consortium aims to generate over a terabase of sequence. “We are thrilled to support this year’s CSP …

… Dr. Sneddon is the Advanced Analysis Group Lead in the Data Science and Informatics Department at the Joint Genome Institute. His team of engineers and scientists builds and operates the data and … Arkin, AP, et al. KBase: The United States Department of Energy Systems Biology Knowledgebase. Nature …

… Program presents… Eyes on the Prize – Launching & Sustaining Startups in Synthetic Biology Who’s … Hoppy Hour @ Calicraft Brewing, Walnut Creek Where:  Joint Genome Institute, 2800 Mitchell Drive, Walnut Creek … Road company) Hosted by Nigel Mouncey, Director, DOE Joint Genome Institute Read a synthesis from the panel discussion  …

… Dr. Louie joined the JGI in 2014 to develop the metabolomics program, … efforts to expand the metabolomics capabilities and product offerings for JGI users.  Using cutting-edge mass … techniques, the platform delivers rich metabolite profiles from diverse biological and environmental samples in …

… Click the cards below to view downloadable pdfs of previous Progress Reports from the Joint Genome Institute.  …