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JGI on the 2020 Highly Cited Researchers List
… Congratulations to the 2020 Highly Cited Researchers at the JGI! They are among those recognized by Clarivate Analytics as “true pioneers in their fields over the … Genome Institute, a DOE Office of Science User Facility  located at Lawrence Berkeley National Laboratory, is committed …
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A Cost-Efficient Way to Convert Yeast into a Cell Factory for Hydroxyapatite
… Innovative technology from this biomanufacturing collaboration is available for licensing. The Science In  Nature Communications , researchers describe a strategy to … This work was supported by laboratory-directed research and development (LDRD). The work … the Office of Science of the U.S. Department of Energy operated under Contract No. DE-AC02-05CH11231. Work at the …
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Engagement Webinar: Utilizing long-read sequencing for metagenomics and DNA modification detection
… recently, these long-reads have been applied to DNA methylation analysis as well as improving metagenome assemblies. … is needed for “regular” vs the ultra-low input library creation protocols for PacBio? A(nswer):  Regular PacBio … currently require input in the ~ 30 – 100ng range. Note that beyond quantity, input quality (i.e., presence of …
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Data Discovery Tool Helps Identify Microbial Roles within Metagenomes
… Protein annotations provide insights into environmental tendencies The … The  Metagenome Stability Diagram — a tool within the Integrated Microbial Genomes and Microbiomes (IMG/M) platform — has been developed to help inform scientists and … by the Office of Science of the US Department of Energy operated under Contract No. DE-AC02-05CH11231. This research …
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Supercharging SIP in the Fungal Hyphosphere
… and fungi The Science Researchers have successfully automated aspects of a commonly-used process for studying … Many microorganisms hold clues to processes like biodegradation, with potential applications in industry and biotechnology for the production of  … Work at Lawrence Livermore National Laboratory was conducted …
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Charting Progress toward Professional Goals
… back on meaningful lessons from their summer experiences at the JGI Berkeley Lab offers a variety of programs to help inspire and train the next generation of STEM professionals. Students can apply for … who serves as their mentor. By contributing to projects that will help them build skills and tools, they gain …
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Innovative Technology Improves Our Understanding of Bacterial Cell Signaling
… environments. The Science Cyclic di-GMP (Guanine Monophosphate) is found in nearly all types of bacteria and interacts with cell signaling networks that control many basic cellular functions. It plays an important role in regulating microbial cellulose production and biofilm formation, …
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JGI at the AGU Fall Meeting
… (online) Town Hall on the role of user facilities in accelerating research and tips for submitting successful proposals: Collaborate With a U.S. DOE User Facility: Learn About Available … 9  4:15pm PT (online) Town Hall on how the Facilities Integrating Collaborations for User Science (FICUS) program allows …
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Cultivating Symbiotic Antarctic Microbes
… and ‘omics techniques to experimentally determine that Nanohaloarchaeota are symbionts, rather than free-living organisms as had been originally … lakes are a “treasure trove” of unknown microbes that play critical roles in environmental processes (related …
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From Berkeley to Binghamton: Tracking Strawberry Evolution
… In the summer of 2015, Adam Session was a postdoc working at the DOE Joint Genome Institute with Dan Rokhsar, who also … Berkeley. Nowadays, Session is an Assistant Professor at Binghamton University in New York. He and Rokhsar have  recently published a Nature Communications paper that builds off their early …
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Olpidium, The Key to the Origin of Terrestrial Fungi
… fungi of Chytridiomycota (the “chytrids”).  A collaborative team led by Joey Spatafora at Oregon State University, Jason Stajich at the University … Genome Institute, a DOE Office of Science User Facility  located at Lawrence Berkeley National Laboratory, is committed …
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A Better Way to Find RNA Virus Needles in the Proverbial Database Haystacks
… Team develops a computational pipeline to sift and characterize RNA virus sequences.  A zoo once offered a coloring book featuring polar bears in winter scenes that came with crayons in various shades of white. To … Genome Institute, a DOE Office of Science User Facility  located at Lawrence Berkeley National Laboratory, is committed …
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