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… Research Scientific Computing Center (NERSC), the DOE Joint Genome Institute (JGI), and the Energy Sciences Network … award recognized the release of MetaHipMer, an end-to-end genome assembler that supports “an unprecedented assembly of … at Lawrence Berkeley National Laboratory, is committed to advancing genomics in support of DOE missions related to …

… “For thousands of scientists around the world, the JGI Genome Portal is a critical resource — it provides access to … more than 13 petabytes of data, accessible through the Genome Portal. “The task of making data more findable and … benefit. The Data Portal — an updated alternative to the Genome Portal — seeks to more broadly represent JGI’s data. …

… recovered and identified from environmental samples (metagenomes). However, the quality and completeness of metagenome-assembled virus sequences vary widely. In a previous … to help researchers assess and improve the quality of metagenome-assembled viral genomes . The Impact The microbes …

… partnering with the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility … at Lawrence Berkeley National Laboratory, is committed to advancing genomics in support of DOE missions related to …

… moss Ceratodon purpureus is a short plant with a complex genome . Now, high-quality reference genome sequences of the male and female plants, each … a single set of chromosomes, are available. The genome assemblies highlight the multiple advances in … The work conducted by the U.S. Department of Energy Joint Genome Institute was supported by the Office of Science of …

… Sorghum genome serves as a reference for the highly complex sugarcane genome . The Science Most species are diploids and have two … of chromosomes (they are “polyploid”) and their complex genomes are more difficult to sequence and assemble, in turn … For the portion of the work conducted by the Joint Genome Institute and the Joint BioEnergy Institute, support …

… I’m Alison Takemura at the US Department of Energy Joint Genome Institute, or JGI.  Two special days occur in April: … I recently caught up with Karolina at the Plant and Animal Genomes, or PAG conference, when in-person meetings were … Karolina’s quest in a future episode of our JGI podcast, Genome Insider. I’m Alison Takemura. See you next time. …

… interact with their environment. Prior to joining the Joint Genome Institute, his focus was primarily on how plants … temperature oscillations throughout the day. At the Joint Genome Institute, Dr. Cole’s research focus has been on … Selected Publications …

… Machine learning methods were applied on sequenced fungal genomes to classify gene families. The Science As a proof of … that “taught” a computer how to classify 101 representative genomes of Dothideomycetes, the largest class of fungi, by … to identify data generated in part through the 1000 Fungal Genomes Project, including 55 newly-sequenced species.  The …