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Mike Sneddon
… Dr. Sneddon is the Advanced Analysis Group Lead in the Data Science and Informatics Department at the Joint Genome Institute. His team of engineers and scientists builds and operates the data and … Liu, O., Akiva, E., Eyles, T. H., Galm, U., Ganesh, S., Hendrix, S. …
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The fungus that made itself at home
… Retracing how the dry rot Serpula lacrymans adapted to a new … plant mass for conversion to sustainable, alternative biofuels and bioproducts. This study lends insights on how the … of Oslo scientists and including researchers at the Joint Genome Institute, a DOE Office of Science User Facility, …
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IMA genome-F18
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Bacteria and Fungi Divvy Up the Work in Forest Floor
… Bacterial enzymes play second fiddle to those from fungi when … analyzing the enzymes present in the complex organic matrix of the forest floor, a team of researchers have found that … to identify proteins, the team compiled DNA sequences (metagenomes) and messenger RNA sequences (transcriptomes) from …
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Phytozome: Tutorial Workshop from 2022 CROPS Conference @HudsonAlpha
… workshop held during the June 2022 CROPS Conference at the HudsonAlpha Institute for Biotechnology. Phytozome is the Plant Comparative Genomics portal of the Department of Energy Joint Genome Institute, and facilitates accurate and insightful …
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Rex Malmstrom
… Dr. Malmstrom is a Staff Scientist and leader of the Microscale Applications group. Before joining the JGI … genomics pipeline that provides JGI users access to the genomes of uncultured microbes.  His group also handles the … Ph.D. in Marine Biology/Biochemistry, University of Delaware BA in …
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The Big Deal About Short Plants
… Despite their diminutive stature, “short plants” such as mosses could be uniquely … plant genetic sequences to what they do. But sequencing the genome of one short plant — fire moss — had an unexpected …
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Inaugural Critical Minerals & Materials Joint Research Portfolio Announced
… Pictured from left: [Top row]: Romy Chakraborty, Dawn Chiniquy, Anne Glaesener, Steven Hallam, …   A total of 20 proposals were selected by the Joint Genome Institute (JGI) and the Molecular Foundry (TMF) for … program, the Molecular Foundry provides researchers worldwide with access to state-of-the-art expertise and …
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JGI Part of Berkeley Lab Team Awarded Best Use of HPC in Life Sciences
… This is excerpted from the full announcement “ Berkeley Lab Receives Multiple 2021 HPCwire … Research Scientific Computing Center (NERSC), the DOE Joint Genome Institute (JGI), and the Energy Sciences Network … Choice Awards . NERSC, JGI, ESnet are U.S. Department of Energy Office of Science user facilities. The HPCwire …
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JGI@25: Building a Better Bean
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable … of the University of Georgia sequenced and analyzed the genome of the common bean. That work was published online … itself.” The original reference genome yielded what are now widely-used molecular markers, and slow-darkening has become …
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Partnering with CalTeach – Training the Next Generation STEM Workforce
… As set out in the JGI Five-Year Strategic Plan – “Beyond … Basepairs, A Vision for Integrative and  Collaborative Genome Science” – through early introduction to the … to further develop a more diverse and inclusive pool of talent for career opportunities at JGI and Berkeley Lab. …
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Anuvia taps JGI for expertise to pinpoint products from beneficial soil microbes
… The practices that support agriculture – such as efficiently using … food and bioenergy security for a steadily growing worldwide population. Anuvia Plant Nutrients , a small Florida … partnering with the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User …
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