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… A quick snippet on Antonio Camargo and Simon Roux, a few of the JGI researchers behind software that finds plasmids and viruses within microbial genomes. As mobile genetic elements like viruses spread …

… food, medicine, and bioenergy crops. But most available genomes are from narrow swaths of the plant tree of life. One project aims to change that. …

… JGI's Simon Roux describes the structure and content of the IMG/VR v3 database (img.jgi.doe.gov/vr), the latest release of IMG database dedicated to viral genomes assembled from metagenomes. He also demonstrates briefly how to leverage novel …

… Register here The workshop is addressed to students and professionals of biology, biomedical research, the health sciences and … devoted to training in the use of the Integrated Microbial Genomes & Microbiomes (IMG/M) system, presented by Natalia …

… researchers have known that many datasets miss a key part of microbial genomes: the mobile genetic elements, or MGEs, that can move …

… Register here for the workshop The MGM Workshop is Module 4 of the Fisabio Summer School.  The workshop is addressed to students and professionals of biology, biomedical research, the health … devoted to training in the use of the Integrated Microbial Genomes & Microbiomes (IMG/M) system, presented by Rekha …

… efforts to expand the metabolomics capabilities and product offerings for JGI users.  Using cutting-edge mass spectrometry-based techniques, the platform delivers rich metabolite profiles from diverse biological and environmental samples in … A, et al. Anaerobic gut fungi are an untapped reservoir of natural products. Proc Natl Acad Sci U S A. 2021;118. …

… early Earth conditions. The Science Through a combination of sequencing tools and techniques applied to samples … the JGI’s Community Science Program , the team used metagenome assemblies, transcriptomes and single amplified genomes from samples collected from several locations to …

… BS – University of Arkansas, Fayetteville, Chemical Engineering Ph. D. – … 2024 Berkeley Lab Recognition of Excellence Award 2016 R&D 100 Winner 2014 Berkeley Lab … T., & Bowen, B. (2013). OpenMSI: a high-performance web-based platform for mass spectrometry imaging. Analytical …

… Register for the meeting here. Here are some sessions of interest (all times in PST unless otherwise noted): … December 7   9:15am PT (online) Town Hall on the role of user facilities in accelerating research and tips for … context for thousands of newly sampled microbial genomes from North American watersheds (Invited)” 4pm CST …

… closely with staff to understand the data-intensive nature of JGI workloads. Dr. Fagnan was appointed CIO of the JGI in 2016, and in 2018 was hired to be the JGI’s … Methodologies workshops. In 2018, Dr. Fagnan was part of the Gordon Bell prizewinning team at the Supercomputing …

… In   April 2020, we mark both the 50th celebration of Earth Day on April 22, and DNA Day on April 25.  On March … at Lawrence Berkeley National Laboratory, is located in one of those counties. The shelter-in-place order has since been … In this brief captioned video, JGI Chief Informatics Officer Kjiersten Fagnan reflects on the personal and …