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… interns from the 2021 cohort describe their deep dives into genomics, computational tools, and big data.  …

… around the planet–through techniques including single-cell genomics and metagenomics. They cited her “landmark” 2013 Nature paper , which uncovered nearly 30 major previously uncharted branches of the tree of life. A senior … Lab), Woyke currently serves as the interim deputy for JGI User Programs. Earlier this year, she was elected to the …

… and sharing concepts, tools and research results in genomics, metagenomics and the human microbiome. The workshop will train … Several sessions will be devoted to training in the use of the Integrated Microbial Genomes & Microbiomes …

… and sharing concepts, tools and research results in genomics, metagenomics and the human microbiome. The … Several sessions will be devoted to training in the use of the Integrated Microbial Genomes & Microbiomes … (IMG/M) system, presented by Rekha Seshadri and Mateus Fiamenghi from the Microbiome Data Science group. …

… leader in data, software, compute, and AI for large-scale genomics and lab informatics. Prior to joining JGI in late … a laboratory information management (LIMS) system. He previously led the NGS Software team and metagenomic data platform at Zymergen, a synthetic biology …

… these untapped metabolic capabilities is often tedious and resource intensive. This is often due to, for example, tight regulation of biosynthetic gene clusters (BGCs) in native hosts, the complexity of cloning and … Science User Facility, has been developing and applying new genomics capabilities that address these issues. Check the …

… Congratulations to Susannah Tringe , one of eight scientists and engineers who … as drivers of methane production, nutrient cycling, greenhouse gas emissions, and water recycling.” Tringe is the interim director of Berkeley Lab’s Environmental Genomics and Systems Biology Division, and JGI’s deputy for …

… JGI (isolates here , here and here ), and the data has been used to better understand arsenic mobility and to better … Reports. Print copies will be available the annual JGI Genomics of Energy & Environment Meeting in San Francisco …

… beyond the tried-and-true method of traditional shotgun metagenomics. One approach uses fluorescence-activated cell sorting (FACS) to sort … a recent Nature Communications paper, uncovering giant virus sequences in soil for the first time. A second approach … of Energy Joint Genome Institute, a DOE Office of Science User Facility  located at Lawrence Berkeley National …

… Biochemistry, Microbiology) Jeremy Schmutz (Cross-field) Susannah Tringe (Microbiology) Tanja Woyke (Biology and … Roux, along with data from a consortium that included Susannah Tringe and Tanja Woyke, were all instrumental in the … as a Nature Microbiology study that leveraged population genomics to investigate archaeal hitchhikers and found that, …

… will help solve energy and environmental challenges. Viruses are everywhere — in soil, the sea and, of course, the … microbes like bacteria, algae and protists, all kinds of viruses impact many ecological processes, including carbon … the microbes there,” said Simon Roux , the Viral Genomics Group Lead at the JGI.  To understand the …

… This single environmental trigger highlights efficiency for users requiring multiple omics methods to examine microbial … chemical production. The Science Soil bacteria in the genus Streptomyces are nature's chemical factories. They hold … , scientists found that adding salt to the growth medium caused Streptomyces coelicolor to activate multiple chemical …