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Computationally Classifying Fungal Lifestyles
… Machine learning methods were applied on sequenced fungal genomes to classify gene families. The Science As a proof of … part through the 1000 Fungal Genomes Project, including 55 newly-sequenced species.  The Impact The class  … The work conducted by the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, …
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JGI@25: Fueling Investigation into Methane-Making Microbes
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable … off plant matter, and their rumen are highly capable of breaking down potential biomass sources in ways we are only … has partnered with researchers around the world to map out genomes of rumen microbes. In 2018, through a JGI Community …
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Genome sequences of key bacterial symbionts of entomopathogenic nematodes: Xenorhabdus cabanillasii DSM17905, Xenorhabdus ehlersii DSM16337, Xenorhabdus japonica DSM16522, Xenorhabdus koppenhoeferii DSM18168, and Xenorhabdus mauleonii DSM17908
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The JGI announces 2024 awardees for our Community Science Program annual call
… From left to right: [above] Olivia Ahern, Adriana Corales, Hugh Cross, Megan … our 2024 Community Science Program Annual Call. “It’s exciting to see the diverse portfolio of successful CSP proposals … this call, as well as smaller-scale calls including our New Investigator and Functional Genomics calls, here on our …
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In Hot Spring Microbial Mat, Viruses Ride “Piggyback”
… For the first time, a team has comprehensively described host-virus dynamics in a microbial mat. The Science In microbial mats, … lysogeny, they can insinuate themselves inside the host’s genome, living quietly and replicating with their host … The work conducted by the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, …
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UC Merced Interns Reflect on Their JGI Summer Projects
… Over the course of eight weeks this past summer, 10 students from UC Merced worked closely with … develop presentation skills as well as build their network in the field of genomics and scientific research. The topics … students worked on ranged far and wide — from implementing new data visualization tools, to using natural language …
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Polar Phytoplankton Need Zinc to Cope with the Cold
… Antarctic algae need their vitamins; zinc fuels some of … researchers at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … The U.S. Department of Energy Joint Genome Institute, a DOE Office of … Microglena on PhycoCosm Data Portal …
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A Step Toward Controlling Soybean Rust
… The United States  is the world’s leading soybean producer , and soybeans … yields by as much as 90 percent. As part of the DOE Joint Genome Institute’s  2016 Community Science Program portfolio … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …
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Adopt-A-Genome
… In this episode, undergraduates adopt genomes that the JGI sequenced, but never published in the literature. These students analyze the genomes, write …
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PhycoCosm Tutorial
… Learn more about PhycoCosm, the largest interactive collection of sequenced algal genomes, omics data and comparative analysis tools developed …
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JGI@25: Building a Better Bean
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements … of the University of Georgia sequenced and analyzed the genome of the common bean. That work was published online … P. vulgaris on Phytozome … Plant Datasets …
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Ancient Algae Reveal Secrets of Plant Evolution
… Research uncovers the genetic foundations that helped plants … land over 600 million years ago. The Science By studying the genes of land plants’ closest algal relative,  … how early plants transitioned from water to land. Key gene groups involved in stress tolerance and multicellularity …
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