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Engagement Webinar: Utilizing long-read sequencing for metagenomics and DNA modification detection
… plant research projects.  More recently, these long-reads have been applied to DNA methylation analysis as well as … weight DNA) is an important factor as well for PacBio metagenomes. Q: How many PacBio metagenomes can I submit?  How … are metagenomes sequenced? A:  For the next call ( CSP New Investigator ), up to 4 long-reads (PacBio) metagenomes …
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Whole Genome Analyses Suggests that Burkholderia sensu lato Contains Two Additional Novel Genera (Mycetohabitans gen. nov., and Trinickia gen. nov.): Implications for the Evolution of Diazotrophy and Nodulation in the Burkholderiaceae
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Genome sequence of the thermophilic fresh-water bacterium Spirochaeta caldaria type strain (H1T), reclassification of Spirochaeta caldaria, Spirochaeta stenostrepta and Spirochaeta zuelzerae in the genus Treponema as Treponema caldaria comb. nov.,
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Secrets of the Needles: What Microbes do on Conifer Leaves
… Novel study looks at microbiomes in aerial surfaces of plants … analysis of mobile genetic elements across all of the metagenomes. Learn more about her time at the JGI here . Bennett is applying the same experiment to a new environment. She is currently working on her thesis to …
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Complete genome sequence of Planctomyces brasiliensis type strain (DSM 5305T), phylogenomic analysis and reclassification of Planctomycetes including the descriptions of Gimesia gen. nov., Planctopirus gen. nov. and Rubinisphaera gen. nov. and emended
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Genome sequences of key bacterial symbionts of entomopathogenic nematodes: Xenorhabdus cabanillasii DSM17905, Xenorhabdus ehlersii DSM16337, Xenorhabdus japonica DSM16522, Xenorhabdus koppenhoeferii DSM18168, and Xenorhabdus mauleonii DSM17908
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Mindfully Moving JGI
… than 100 at its peak, all the machines were switched off. Over the next two weeks, they were crated, shipped to, and … installed at the  Integrative Genomics Building , JGI’s newly-built home located in the heart of the Berkeley Lab … three years ago. For JGIers, the moving process began in 2017 with annual one-day cleanups. During those days, they were …
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JGI Interns at UC Merced Earn CAMP Merit Awards
… partnership between DOE JGI and UC Merced to promote diversity and inclusion in science and research, two … included Cristhian Gutierrez Huerta and Bryan Rangel Alvarez, both California Alliance for Minority Participation … (CAMP) students at UC Merced. CAMP is a statewide initiative funded by the National Science Foundation (NSF) and …
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Dealing with Drought: Uncovering Sorghum’s Secrets
… Over 40 percent of the cereal crop’s genes respond to drought … common images in many regions due to more extreme weather events such as heat waves, droughts and floods. The planet’s … datasets. The results from the first year showed that 10,727 genes or 44% of expressed genes respond to drought …
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Crysten Blaby-Haas
… JGI in 2022 as lead of the Biomolecular Materials Initiative, a partnership between JGI and the Molecular Foundry, a … user facility at Berkeley Lab. She is spearheading the development of a joint user capability between the JGI and … and led the Quantitative Plant Science Initiative (2017-2022), a BER Science Focus Area (SFA).  …
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Engagement Webinar: Accessing NEON’s Environmental Sample Archives, Applying JGI & EMSL Omics Tools
… The  National Ecological Observatory Network (NEON) is a network of field research sites … learn more about BioSANS. Letters of Intent are due March 17, 2021 for the FICUS proposal call. Q&A from the Webinar: … staying up to date via our website, social media, and newsletter. Q:  How would people find out about the NEON …
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Access to Rock Star Scientists
… graduate students Candace Cole, Mo Kaze, Akshay Paropkari, Vicente Ramirez and Rhondene Wint had summer 2018 … research culminated in presentations on their work delivered during the 5th anniversary celebration of the internship program. Candace Cole, …
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