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Complete genome sequence of the thermophilic, hydrogen-oxidizing Bacillus tusciae type strain (T2T) and reclassification in the new genus, Kyrpidia gen. nov. as Kyrpidia tusciae comb. nov. and emendation of the family Alicyclobacillaceae da Costa and
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Complete genome sequence of Planctomyces brasiliensis type strain (DSM 5305T), phylogenomic analysis and reclassification of Planctomycetes including the descriptions of Gimesia gen. nov., Planctopirus gen. nov. and Rubinisphaera gen. nov. and emended
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Researching and Solving Real-World Problems with the 2023 JGI-UC Merced Interns
… huge amounts of data. I was excited to work on fungal genomics and the fact that I got to do a project involving … get to meet a lot of researchers that have been working on genomics data for a very long time, and it’s great to see …
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Genome sequences of key bacterial symbionts of entomopathogenic nematodes: Xenorhabdus cabanillasii DSM17905, Xenorhabdus ehlersii DSM16337, Xenorhabdus japonica DSM16522, Xenorhabdus koppenhoeferii DSM18168, and Xenorhabdus mauleonii DSM17908
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A Natural Mechanism Can Turbocharge Viral Evolution
… who led the research team and is the head of the Viral Genomics group at the JGI, thinks that if you’re a virus or … (samples and metadata from Stordalen Mire, Sweden) by the Genomic Science Program of the United States Department of …
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Accelerating Metagenomics Discoveries with Deep Learning
… in an online workshop to harness deep learning for metagenomic data.  Metagenomic data, or DNA sequencing data gathered from whole … deep learning to automatically generate insights from metagenomic data. In deep learning, a branch of machine … Berkeley National Laboratory, is committed to advancing genomics in support of DOE missions related to clean energy …
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Exploring Possibilities: 2022 JGI-UC Merced Interns
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Webinar: PhycoCosm Tutorial
… Berkeley National Laboratory, is committed to advancing genomics in support of DOE missions related to clean energy …
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JGI@25: Expanding Metagenomics to Capture Viral Diversity
… the microbes there,” said Simon Roux , the Viral Genomics Group Lead at the JGI.  To understand the … Along with highlighting the viruses in a given sample, metagenomics shed light on another key aspect of viruses in the … As pioneers of this field, the JGI has leveraged metagenomics to boost understanding of environmental viruses. In …
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Toasting to the 2020 JGI-UC Merced Summer Internship Program
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Building Wet and Dry Lab Skills
… mentors Yi Zhai and John Vogel from the Plant Functional Genomics Group to study the effects of  Brachypodium …
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Mike Sneddon
… leader in data, software, compute, and AI for large-scale genomics and lab informatics. Prior to joining JGI in late … system. He previously led the NGS Software team and metagenomic data platform at Zymergen, a synthetic biology … D., Serber, Z., Shock, J., Sneddon, M., and Yang, X. Metagenomic library and natural product discovery platform. …
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