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Krishna is responsible for the design and maintenance of the Integrated Microbial Genomes (IMG) data warehouse, and integration of genomic and metagenomic data with transcriptomics and …

Marcel is in charge of several production pipelines (gene calling, functional … annotation and methylomics) that run on microbial genomes and metagenomes. He also works on automating intra-department data …

… more about MycoCosm, a data portal with over 2,000 fungal genomes and multi-omics datasets, equipped with interactive …

A quick snippet on Antonio Camargo and Simon Roux, a few of the JGI researchers behind software that finds plasmids and viruses within microbial genomes. As mobile genetic elements like viruses spread …

… food, medicine, and bioenergy crops. But most available genomes are from narrow swaths of the plant tree of life. One project aims to change that. …

Register here The workshop is addressed to students and professionals of biology, biomedical research, the health sciences and … devoted to training in the use of the Integrated Microbial Genomes & Microbiomes (IMG/M) system, presented by Natalia …

… the DOE JGI hosted 10 interns who came from a wide range of backgrounds. Many of them spent the summer crunching genomic data at a … summer were: Rida Ali, who worked with T.B.K. Reddy on the Genomes OnLine Database; Sarah Fruchart , who worked with …

Register for the meeting here. Here are some sessions of interest (all times in PST unless otherwise noted): … context for thousands of newly sampled microbial genomes from North American watersheds (Invited)” 4pm CST … Hall D-F poster B25J-1604: Eoin Brodie, Berkeley Lab: “Uncovering microbial metabolic trajectories during the …

… group. His research interests lie in use and development of bioinformatics tools for elucidation of biosynthetic gene clusters in bacteria and fungi. Prior … (1996) … List available on Google Scholar … Education … Publications …

… efforts to expand the metabolomics capabilities and product offerings for JGI users.  Using cutting-edge mass … techniques, the platform delivers rich metabolite profiles from diverse biological and environmental samples in … Sci Rep. 2013;3: 1656. … Education … Selected Publications …

… bioenergy and environmental objectives. … BS – University of Arkansas, Fayetteville, Chemical Engineering Ph. D. – … & Metabolic Biology … 2024 Berkeley Lab Recognition of Excellence Award 2016 R&D 100 Winner 2014 Berkeley Lab … Google Scholar. … Education … Awards and Honors … Selected Publications …

… closely with staff to understand the data-intensive nature of JGI workloads. Dr. Fagnan was appointed CIO of the JGI in 2016, and in 2018 was hired to be the JGI’s … … About the JGI Chief Informatics Officer … Selected Publications … Awards and Honors …