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… Since joining the DOE Joint Genome Institute in 2016, Dr. Otani has been studying secondary metabolism in microbes, … BS, Engineering, Tokyo Institute of Technology Master's, Biotechnology, University of Tokyo PhD, … Kunakom S, Otani H, Udwary DW, Doering DT, Mouncey NJ. …

… Analysis of haloarchaeal metagenomes broadens understanding of Antarctic biogeography. … occur in response to viral infections and are important for virus-host interactions. Analysis of strain variation showed … This work was supported by the Australian Research Council …

… In this episode, undergraduates adopt genomes that the JGI sequenced, but never … published in the literature. These students analyze the genomes, write reports, and publish first-author papers, …

… Learn more about PhycoCosm, the largest interactive collection of sequenced algal genomes, omics data and comparative analysis tools developed by the Joint Genome Institute (JGI), a US Department of Energy Office of …

… Genomes from uncultivated bacteria offers clues to ancestral bacteria’s energy sources. … teams joined forces and data sets to describe bacterial genomes for related (“sibling”) lineages Margulisbacteria … The U.S. Department of Energy Joint Genome Institute, a DOE Office of …

… A “bait and hook” single-cell genomic approach to … by Tanja Woyke at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … by protein in vitro expression and mass spectrometry-based enzyme activity assay. The work was  reported in  The …

… Analysis reveals the microbial community involved in a … break down PCE into the chemical compound ethene. Applying genome sequencing and analysis, the researchers identified … were sequenced by the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User …

… Nanohaloarchaeota cultures reveal they are symbionts and not … consequences of microbe-microbe interactions. Using metagenomes recovered directly from environmental samples and … dependent on the other for required nutrients—is genome size. The obligate symbiont’s genome is often reduced …

… A special issue of Synthetic Biology celebrates research … This is where the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … more than 10 papers, including two Nature Plants publications, in five years, have come out of the …

… Mini-Metagenomics Approach Helps Identify Novel Archaeal Methane Metabolism. … Biohub, and the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science user … and Verstraetearchaeota lineages. The archaeal genome was detected in samples collected by Stephen Quake’s …

… A workflow for capturing the genetic make-up of specific … and then efficiently retrieve and characterize their genomes. The Impact Despite great strides in generating … view of a population’s genetic makeup and identifying viruses interacting with these populations. Development of …

… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable … year, the JGI team reported the first closed and finished genome derived from an uncultured bacterial single cell – a …