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Marcel is in charge of several production pipelines (gene calling, functional … annotation and methylomics) that run on microbial genomes and metagenomes. He also works on automating intra-department data …

… computational biologist who spends his days wrangling viral genomes and occasionally remembering to document his code. At JGI, he develops tools for viral discovery and analysis, with a particular fondness … just "spicy messenger RNA", and that somewhere in the mess of genetic sequences lurks the next cool virus – if only our …

… more about MycoCosm, a data portal with over 2,000 fungal genomes and multi-omics datasets, equipped with interactive web-based tools for comparative genomics and community annotation. Presented …

A quick snippet on Antonio Camargo and Simon Roux, a few of the JGI researchers behind software that finds plasmids and viruses within microbial genomes. As mobile genetic elements like viruses spread …

JGI's Simon Roux describes the structure and content of the IMG/VR v3 database (img.jgi.doe.gov/vr), the latest release of IMG database dedicated to viral genomes assembled from metagenomes. He also demonstrates …

Register here The workshop is addressed to students and professionals of biology, biomedical research, the health … and seminars as well as practical hands-on sessions in bioinformatics and biostatistics Several sessions will be devoted to training in the use of the Integrated Microbial Genomes & Microbiomes (IMG/M) system, presented by Natalia …

… the DOE JGI hosted 10 interns who came from a wide range of backgrounds. Many of them spent the summer crunching … analyses at their desks. As part of the DOE JGI’s efforts to promote diversity and inclusion in the sciences, … summer were: Rida Ali, who worked with T.B.K. Reddy on the Genomes OnLine Database; Sarah Fruchart , who worked with …

… hosts sessions in New Orleans and online. Register for the meeting here. Here are some sessions of interest (all times in PST unless otherwise noted): … context for thousands of newly sampled microbial genomes from North American watersheds (Invited)” 4pm CST …

Dr. Udwary serves as a computational biologist for JGI’s Secondary Metabolites group. His research interests lie in use and development of bioinformatics tools for elucidation of biosynthetic gene … (1996) … List available on Google Scholar … Education … Publications …

… projects, Dr. Bowen’s work focuses on developing high-performance computing workflows and integrating mathematics and … bioenergy and environmental objectives. … BS – University of Arkansas, Fayetteville, Chemical Engineering Ph. D. – … Google Scholar. … Education … Awards and Honors … Selected Publications …

Fagnan began working with JGI in 2012 as a NERSC bioinformatics computing consultant, after completing a petascale … closely with staff to understand the data-intensive nature of JGI workloads. Dr. Fagnan was appointed CIO of the JGI in … … About the JGI Chief Informatics Officer … Selected Publications … Awards and Honors …

… a Single Proposal webinar, inviting researchers to apply for access to multiple genomics and molecular … just one research proposal. Guest speaker Michelle O’Malley of UC Santa Barbara talked about how her approved FICUS … to their resources. … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …