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Impacts of land-use change on soil microbial communities and their function in the Amazon Rainforest
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Effect of Temperature and pH on Microbial Communities Fermenting a Dairy Coproduct Mixture
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Genetic Transfer in Action: Uncovering DNA Flow in an Extremophilic Microbial Community
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Respiratory processes of early-evolved hyperthermophiles in sulfidic and low-oxygen geothermal microbial communities
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Functional redundancy and metabolic flexibility of microbial communities in two Mid-Atlantic bays
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JGI@25: A Single Cell, Myriad Microbial Discoveries
… a novel technique to access high-quality genomic information using minute quantities of DNA derived from … and offered a way for researchers to study the planet’s microbial diversity, much of which remains unknown and … cell (seen here in a glass capillary), researchers sequenced and assembled the first complete genome of an …
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Hiroshi Otani
… is particularly interested in understanding how, when and why microbes decide to produce which metabolites. … 7;12(1):18909. Otani H, Mouncey NJ. RIViT-seq enables systematic identification of regulons of transcriptional … H, Mouncey NJ. New keys to unlock the treasure trove of microbial natural products. Nat Rev Microbiol. 2021 …
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JGI Announces 2023 Community Science Program Awardees
… inter-organismal interactions, understanding natural communities important for carbon storage, nutrient cycling, and climate change; and biofuels, biomaterials and bioproducts. Learn more about our proposals, …
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Engagement Webinar: Utilizing long-read sequencing for metagenomics and DNA modification detection
… on how the JGI employs single-molecule, long-read DNA sequences to aid with genome assembly and transcriptome analysis of microbial, fungal, and plant research projects.  More … metagenomes can I submit?  How deeply are metagenomes sequenced? A:  For the next call ( CSP New Investigator ), …
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Partnerships: Myco-Ed
… 800+ iNaturalist observations All MycoEd protocols, course materials and bioinformatics exercises are freely available through the links … Project MycoCosm MycoEd group page Protocols, teaching materials and bioinformatics exercises … and distribution of fungal genome datasets. It includes JGI-sequenced and publicly available datasets encompassing a …
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Genomic sequencing of single microbial cells from environmental samples
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JGI@25: Using Team Science to Build Communities Around Data
… Spatafora of Oregon State University led the effort to sequence 1000 fungal genomes to create two reference genomes … by more than 100 participants. Roughly 700 have been sequenced and annotated, representing 384 fungal families … now, and eight more that we are likely to take forward with material in hand,” said Jeremy Schmutz, lead of the JGI’s …
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