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Model Fern Reveals Insight into DNA Thievery in Ferns
… power of plants, and the lessons they can teach us, are why the U.S. Department of Energy (DOE) Joint Genome … richardii marks the first published manuscript of a genome sequence generated through the OGG. For a long time, C-fern … next-generation plant biology. … The work conducted by the US Department of Energy Joint Genome Institute is …
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JGI Workshops at PAG
… the length and breadth of algal diversity, the numbers of sequenced algal genomes, and the quality of those genomes, … biology and hear from researchers who are applying genomic sequence information to BER funded activities of plant …
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Partnerships: Myco-Ed
… and distribution of fungal genome datasets. It includes JGI-sequenced and publicly available datasets encompassing a … analyses. The Mycocosm user interface is designed for use by mycologists and researchers, facilitating the transition from genomic sequences to biological inference and understanding of …
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A Natural Mechanism Can Turbocharge Viral Evolution
DGR could mutate the virus’ tail fiber proteins, and thereby allow them to embrace different cells. Since that … to adapt to changing environments. It also sheds light on why the rapid injection of mutations in a particular gene … all at once from the same environment, called metagenomes. Why? Simon Roux, who led the research team and is the head …
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Microbiome Data Science Team
Biology is currently experiencing a revolution brought on by rapid developments in genomics and other omics … al. (2017) Protein structure determination using metagenome sequence data. Science   355(6322):294-298 Paez-Espino D. et … al. (2015) Microbial species delineation using whole genome sequences. Nucleic Acids Res. 43(14):6761-71 Kyrpides NC et …
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2021 JGI Proposal Call Brings New Investigators into Community Science Program
Brassicales Genome Initiative. Brassicales is represented by more than 4,700 species, and the proposal focuses on … to as natural products, the proposal includes plans to sequence several thousand Actinobacteria strains and then … through photosynthesis, but only a fraction have been sequenced.  Adriana Lopes dos Santos from Singapore’s …
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JGI on the 2020 Highly Cited Researchers List
Researchers at the JGI! They are among those recognized by Clarivate Analytics as “true pioneers in their fields … that  released a very high quality reference genome sequence of green millet ( Setaria viridis ) in  Nature … from samples provided by more than 200 scientists and sequenced by the JGI through the  Community Science Program, …
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Effects of Polar Light Cycle on Microbial Food Web
… microbial populations in other Antarctic lakes and the nearby Southern Ocean shift from phototrophs to archaea when … Ocean roughly 5-7,000 years ago and has been well-studied by many researchers for nearly five decades. In these frigid … is covered in thick ice, with a combination of marine and freshwater below. This stratified mixture holds oxygenated …
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John Vogel
… on developing plant functional genomic resources (e.g. sequenced mutant collections, transformation technology, … regulation, abiotic stress tolerance, and the mechanisms by which plants interact with their microbiomes. In … et. al. 2020 Gradual polyploid genome evolution revealed by a pan-genomic analysis of Brachypodium hybridum and its …
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SpaRC: scalable sequence clustering using Apache Spark
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Improving genome assemblies by sequencing PCR products with PacBio
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Complete Genome Sequence of Francisella philomiragia ATCC 25017
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