Search

… for User Science (FICUS) program, two Department of Energy (DOE) Office of Science national user … and bioproducts. For example, Sabeeha Merchant of the University of California, Berkeley studies the alga  … interactions focus area comes from Malak Tfaily of the University of Arizona. Her team aims to use data from an …

… viruses outnumber the microbes by at least another order of magnitude. For years, scientists at the DOE Joint Genome … is part of another project led by Owen White at the University of Maryland, Baltimore. Both projects will build … CheckV , which assesses the quality and completeness of metagenome-assembled viral genomes ( Nature Biotechnology , …

… Institute.  The Science Researchers report the discovery of miniature Clustered Regularly Interspaced Short … by a team led by Jennifer Doudna’s group at the University of California (UC), Berkeley, which is also … by searching for Cas12d homologs across IMG/M’s assembled metagenomic data. It turned out that some of these were …

… get any sunlight, and yet they still support a unique array of microorganisms adapted to living in extreme conditions. … that live there.  Researchers from Portland State University and the University of Wisconsin-Madison collected … at Lawrence Berkeley National Laboratory, contributed metagenomic sequencing to the study as well as  genome …

… Nov. 2: Getting Credit for Scientific Contributions of Any Size What is considered to be a scientific … students (and their mentors) how to begin establishing a professional presence through getting credit for any scientific contribution they make, whether as part of a course or internship, and before ever publishing a …

… Pictured is a timelapse of the Integrative Genomics Building (IGB) seen above is … Area are also co-located in the IGB. Vision The vision of the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office …

… JGI’s  MycoCosm data portal , an interactive collection of sequenced fungal genomes, omics data and comparative … there a tool in this platform to search fungal genomes in metagenomes? A: Search in metagenomes is available from another JGI portal, IMG:  … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science …

… JGI’s  PhycoCosm data portal , an interactive collection of sequenced algal genomes, omics data and comparative … on, there are 7 genomes on NCBI but your portal has only 2 of them. A: Watch the video (above) for the answer provided … would it be possible to add a feature to look for synteny of the target genome with itself, to identify regions that …

… Joint Genome Institute (JGI) provide access to a variety of tools that leverage stable isotopes to measure carbon and … 1. Q(uestion): How much DNA is required for the JGI SIP metagenomics pipeline? A(nswer):  The more the better. We want to put at least a microgram of DNA in the tube so you’d need at least 2 micrograms in …

… through the plant portal  Phytozome . Now the portal offers a way for users to more easily access public data sets through a common set of metadata. For Steve Wilson, JGI’s Systems Engineering … ). “We have made a concerted effort to create a common set of ‘baseline metadata’ across the files that are submitted …

… For the Joint Genome Institute, the end of 2018 was marked by a celebration of contributing over one “petabase” – a quadrillion nucleotide bases of DNA sequence to the public data repositories over its now …

… fungal infections. That’s why Mars, Inc., a maker of chocolate for more than 100 years and one of the world’s largest buyers of cocoa, is collaborating with others to develop healthier … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science …