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In Hot Spring Microbial Mat, Viruses Ride “Piggyback”
… mats are wildly prevalent, containing an estimated 40 to 80 percent of all the microbial cells on Earth. As … a more systematic picture through single-cell and metagenomic sequencing. A team co-led by Mária Džunková, … sample — a small proportion of the sample’s billions of bacterial and archaeal cells — and detected the virus in 34 …
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Host population diversity as a driver of viral infection cycle in wild populations of green sulfur bacteria with long standing virus-host interactions
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H2-saturation of high affinity H2-oxidizing bacteria alters the ecological niche of soil microorganisms unevenly among taxonomic groups
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Synergistic interactions between anammox and dissimilatory nitrate reducing bacteria sustains reactor performance across variable nitrogen loading ratios
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Matt Blow
… genomic technologies and to understand genome function in bacteria. … Bowers et al. 2024. scMicrobe PTA: Near Complete Genomes from Single Bacterial Cells bioRxiv , 2024.01. 30.577819 2. Dicenzo et … 3. Baumgart et al. 2021. Persistence and plasticity in bacterial gene regulation. Nature methods 18 (12), 1499-1505 …
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Genome sequence of the clover-nodulating Rhizobium leguminosarum bv. trifolii strain TA1
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JGI Launches Latest Strategic Plan
… Biosciences Associate Laboratory Director, of the 100-page document with over 200 actionable milestones. JGI … leadership role in a Microbiome Data Science effort (pages 37-39) and the launching of a Secondary Metabolites research group (pages 47-49). “Our hope is to circulate this document widely …
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JGI Contributes Nine to 2022 Highly Cited Researchers List
… selection of studies these busy bees contributed to:  Giant bacteria visible to the naked eye :  Natalia Ivanova and  … to ground-breaking research following the discovery of bacteria 5,000 times the average size. Woyke’s  Single Cells … He and  Tringe were also involved in a study that applied metagenomic capabilities to  studying phytoplankton …
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Complete Genome Sequences for the Anaerobic, Extremely Thermophilic Plant Biomass-Degrading Bacteria Caldicellulosiruptor hydrothermalis, Caldicellulosiruptor kristjanssonii, Caldicellulosiruptor kronotskyensis, Caldicellulosiruptor owensensis, and
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JGI Welcomes New UEC Members
… a breadth of institutions, research topics and career stages. The election period concluded on October 21. The … To view the full roster of members visit the UEC page . …
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Sphingomonas palmae sp. nov. and Sphingomonas gellani sp. nov., endophytically associated phyllosphere bacteria isolated from economically important crop plants
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Taking Stock of the Known and Unknown Microbial Space
… Metagenomic datasets could help map out microbial diversity … still unknown.  “We took a deep dive into over 1.8 million bacterial and archaeal genomes to see how much of their … quality scores representing potential genomes, and nearly 44,000 metagenomes. All of the data are publicly available …
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