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How Maize Makes An Antibiotic Cocktail
… Maize produces a family of compounds that protects it against infections — using … enzymes. The Science Maize ( Zea mays ) produces a plethora of antibiotics called zealexins. Even though scientists have … produced in every corn variety and protect maize by fending off fungal and microbial infections. Scientists had assumed …
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RECAP: Keynote Speakers Talk Innovation at 2022 JGI Annual Meeting
… The JGI was honored to host some of the brightest minds in genetics as part of our  2022 Annual Meeting . The meeting was a hybrid … keynote speeches from Nobel Laureate Jennifer Doudna of the University of California, Berkeley and Berkeley Lab, … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science …
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Bacteria and Fungi Divvy Up the Work in Forest Floor
… analyzing the enzymes present in the complex organic matrix of the forest floor, a team of researchers have found that there is a striking division … from their soil samples. This gene expression dataset was particularly important for characterizing fungal … Foundation (18- 25706S and 20-02022Y), by the Ministry of Education, Youth and Sports of the Czech Republic …
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A New Actinobacterial Chapter in the Genomic Encyclopedia of Bacteria and Archaea
… Large-scale comparative analysis leads to identification of biosynthetic gene clusters for novel secondary … The planet’s microbial diversity is immense, yet much of it remains unknown. For more than a decade, researchers … approaches applied to relatively tractable samples like lakes and rivers could help fill in the gaps,” she added. …
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An Enzyme System to Help Catalyze Bioproduction of Plastic
… By characterizing the structure and function of a methylthio-alkane reductase system, researchers could … more.  Microbes excel at recycling the abundant miscellanea of their surroundings. Case in point: for us, the smell of the ocean simply signals we’re near the beach. For …
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Synthesis
… automations for DNA design, assembly and analysis Overview of synthesis products The JGI DNA Synthesis platform enables … BOOST provides a suite of tools to automate sequence design for assembly by Gibson, … Software Engineers in the Synthetic Biology Informatics Group …
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Researching and Solving Real-World Problems with the 2023 JGI-UC Merced Interns
… Emerald Nash and mentor Jonelle Basso, Experimental Study of Root Colonization by Resident Phages of a Plant Growth Promoting Rhizobacterium Graduate Interns … extremophile protists from a hypersaline alkaline lake in California. Sandra Hernandez Gonzalez : Out of this …
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A Cost-Efficient Way to Convert Yeast into a Cell Factory for Hydroxyapatite
… hydroxyapatite, a high-value biomaterial with a wide range of industrial applications. The team was led by researchers at two U.S. Department of Energy national user facilities – the DOE Joint Genome … in the development and biotechnology applications of various biomaterials. These efforts align with BER …
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In Hot Spring Microbial Mat, Viruses Ride “Piggyback”
… a microbial mat. The Science In microbial mats, communities of microorganisms live among viruses that infect them. But … interactions? Do generalist viruses run rampant, capable of infecting different host species? Or, do they tend to … the mat’s viruses specialize to single hosts, and instead of lysing them, which appears to be prevalent in marine …
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2021 JGI Proposal Call Brings New Investigators into Community Science Program
… JGI interests in algae and secondary metabolites. A total of 27 proposals have been  approved through the annual  Community Science Program (CSP) call of the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science …
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JGI User Executive Committee Expands
… have been elected to the User Executive Committee (UEC) of the U.S. Department of Energy Joint Genome Institute … of Wisconsin-Madison and a co-investigator in the Great Lakes Bioenergy Research Center. Her research focus is … or improving bioinformatics tools that can help with dataset analysis, as well as how they can be shared with and …
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Pinning Down a Piece of Photosynthesis
… By studying the structure and function of a cyanobacterial protein, researchers have new insights … cycle carbon in changing conditions. The products of photosynthesis are easy to point out. Plants, algae and … intricate connections, and many, many moving parts. A lot of these moving parts are proteins — amino acid structures …
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