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… stories of JGI-supported research, connected to nutrient cycles. Francis Martin and Lucas Auer discuss their work on …

… is key to understanding their ecosystem functions in processes ranging from nutrient cycling to plant health and growth. Developing a scalable computational approach that provides researchers … engaged in mission relevant energy and environmental processes. …

… a bioeconomy, where renewable, biological resources drive processes, products, and services.  Advancing the bioeconomy … Advancing the JGI’s ability to predict and respond to biogeochemical cycles, which builds on the DOE’s interest in mitigating …

… mission areas of bioenergy and environmental microbiome processes.  Among the JGI’s largest dedicated partnerships …

… pathway. So how do we do genome mining now? What does that process look like? DAN UDWARY: Yeah, it’s a little bit … like. We know what a non-ribosomal peptide or a ribosomally processed peptide looks like. And so we take genes that we … order to assemble these genomes, you go through a binning process. So you look at the DNA itself and try to make some …

… could bring key insights into how our planet’s nutrient cycles are regulated, and the ways organisms can adapt to …

… not easy to find out) A: If these names are assigned in the process of annotation or manual curation they are … our development plans 15.  Q: What is the user annotation process (are these functional annotations) and how are these … as they may coordinate users in the community annotation process for their genomes. User annotations are highlighted …

… to these communities so that it’s not just an extractive process. DAN UDWARY: That’s beautiful. ALISON TAKEMURA: … you decide to tackle a new target or whatever? What’s your process for discovery? CASSANDRA QUAVE: Right, so I think the process really begins with the construction of our library. …

… embargo .  For each data or analysis product (raw or processed), the embargo starts at completion of standard …

… at the end, we somehow have the big goal of making that process a little more effective than it is now. Or a little … right? NADINE ZIEMERT: Yes, and then how effective this process, which is coincidental, but it’s very effective, … in being able to sequence them and standardize that sample processing. Do you see that as a way that JGI could help …