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… JGI’s  MycoCosm data portal , an interactive collection of sequenced fungal genomes, omics data and comparative … the potential to create new EcoGroups – reach out to us. 3.  Q: Can you use NCBI taxonomy information to search your … While are still working on finalizing the tree and related publication the tree is still in development and not …

… Large-scale comparative analysis leads to identification of biosynthetic gene clusters for novel secondary … BGC Repertoire in Actinobacteria Over the years more than 3,400 genomes have been sequenced from curated DSMZ … resource, but also yielding and supporting many high-impact publications ,” emphasized Markus Göker, who managed the …

… In honor of the JGI's 25th anniversary in 2022, we have revisited a … invisible to the sampling experiments probing Earth’s ecosystems. Viruses rarely grow well in environmental … from different ecosystems all over the world, including 3,908 isolate reference DNA viruses and 264,413 …

… for the global research community. The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) has released … insights into a vast range of organisms and ecosystems. These kinds of data could open opportunities … for the next five years. It also includes more than 130 implementation milestones to help track and drive …

… user engagement. The Science In addition to the core set of "primary metabolites"—chemical compounds shared by most … public database for the research community. With more than 13 million BGCs in the catalog at the time of publication, it is the largest repository of BGC sequence …

… the JGI in 2017 to lead viral genomics research as part of the Metagenome Program. His responsibilities include the development of novel computational tools to identify virus sequences, the design of new experimental approaches to link viruses to their … Neri et al., 2023. Expansion of the global RNA virome reveals diverse clades of …

… Dr. Grigoriev joined the JGI in 2003, following his postdoctoral training at UC Berkeley and … at Lawrence Berkeley National Laboratory, and an Adjunct Professor of Plant and Microbial Biology at University of California, … at the JGI. Click to learn more about the program's areas of focus, major initiatives and more.  …

… big the room is.  A new study  published online Oct. 11, 2023 in  Nature highlights the vast array of functional diversity of microbes through a novel approach … environment — whether that be soil, animal hosts, marine ecosystems, etc.  “So, they must be doing something …

… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the science and scientists of secondary metabolism.  DAN: Hello, and welcome back for … genome, the genome predicts they often can produce around 30 – more than 30 compounds. So, this was a complete …

… . The Science A team led by researchers at the University of California, Berkeley used a multi-omics approach to … N. crassa is the model organism for filamentous fungi, all of which contain a wide array of plant cell-wall degrading enzymes (PCWDEs) that allow …

… the slightly murky waters in the tube look like a scoop of stormwater, complete with leaves, debris, and even … bacteria aren’t usually visible without the assistance of microscope. “It’s 5,000 times bigger than most bacteria. … mangroves. “Mangroves and their microbiomes are important ecosystems for carbon cycling . If you look at the space …

… In honor of the JGI's 25th anniversary in 2022, we have revisited a … at over 180 organizations in 29 U.S. states and 35 countries. (Graphic: Neil Byers) The JGI launched the … genomes that are both large and complex. The first publication of a genome generated by the OGG initiative — …