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A One-Stop Shop for Analyzing Algal Genomes
The PhycoCosm data portal allows anyone to freely investigate the genes of more than 100 … 100 algal genomes, compare them, and visualize supporting experimental data. The Impact Algae are important organisms. … Genomes and Microbiomes (IMG/M) system for microbial and metagenome datasets, MycoCosm for comparative analysis of …
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Chordate evolution and the three-phylum system
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Identifying the Microbial Cleanup Crew at a Superfund Site
Analysis reveals the microbial community involved in a … The DOE has been similarly invested in environmental management, contributing to bioremediation efforts for … , they were able to analyze the resulting metagenomic data. (Data from the project are available on the  JGI …
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Network Modeling of Complex Data Sets
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Metagenomic analysis of intertidal hypersaline microbial mats from Elkhorn Slough, California, grown with and without molybdate
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Doubling Down on Known Protein Families
… researchers confirm microbial diversity is wilder than ever. Imagine researchers exploring a dark room with a … the collective power of more than 26,000 microbiome datasets, all accessible through the publicly available  … (IMG/M) database, they successfully crafted the Novel Metagenome Protein Families (NMPF) Catalog.  “We can now …
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2024 Progress Report
… (KBase), the National Microbiome Data Collaborative (NMDC), and Berkeley Lab Biosciences Area are also co-located in the … processed 13,700 metabolomics samples With our users, 247 publications were published   … Our primary objective is to … algorithms to identify billions of protein sequences in metagenomes.  We continue to engage with our user community …
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PR-PR: Cross-Platform Laboratory Automation System
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Sequence to Function: Applications and Analysis for the Future (SFA²F)
The Sequence to Function: Applications and Analysis for the Future (SFA²F) meeting brings together …
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Embrace experimentation in biosecurity governance
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Metagenomic analysis of microbial consortium from natural crude oil that seeps into the marine ecosystem offshore Southern California
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Fine-scale evaluation of two standard 16S rRNA gene amplicon primer pairs for analysis of total prokaryotes and archaeal nitrifiers in differently managed soils
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