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Plant Microbial Interactions Group
… are complex organisms that harbor a fantastic diversity of cell types and associated organisms, including fungal and … and are influenced by microbial partners. We use a variety of genomics-powered tools to study this complexity, … fungi, viruses. Resident viruses can be found in a myriad of bacterial strains, whereby they can modulate host …
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Help from Citrus’ Bitter, Hardier Cousin
… The chromosome-scale genome sequence of trifoliate orange yields clues to disease-resistance that … from greening disease. You’ve probably never heard of trifoliate orange. Otherwise known as  Poncirus trifoliata , it’s an evolutionary cousin of the  Citrus genus, which gives us …
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Natural Prodcast Episode 17: Cassandra Quave
… Prodcast episode 17. The guest we have this week is Professor Cassandra Quave from Emory University, with joint … I think on COVID that we’re getting ready to submit for publication and have found some interesting hits for that as … it’s not that easy. There are still not that many plant genomes, certainly nowhere close to bacterial kinds of …
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Polar Phytoplankton Need Zinc to Cope with the Cold
… Antarctic algae need their vitamins; zinc fuels some of their most important functions. Even in the chilly waters … linked those species-level observations with data on microalgal communities across different ocean latitudes from pole … bioenergy and biomanufacturing. The JGI Algal Program makes genomes and multi-omics data from JGI CSP projects publicly …
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Shattering Expectations: Novel Seed Dispersal Gene Found in Green Millet
… Survey of Setaria's natural diversity reveals seed dispersal in … Program , sequences of several hundred green millet plant genomes were generated, though the final analyses focused on … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science …
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Metabolomics Program
… The JGI’s Metabolomics Program works to uncover the roles of small molecules in biological systems, linking them with genomic data to enhance our understanding of genome science, organisms, and ecosystems at the … Integrating genomics with metabolomics fuels the discovery  of novel metabolites, genes, and proteins. It also enables …
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A korarchaeal genome reveals insights into the evolution of the Archaea
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Specialized proteomic responses and an ancient photoprotection mechanism sustain marine green algal growth during phosphate limitation
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Uncovering Novel Genomes from Earth’s Microbiomes
… Large-scale comparative analysis leads to identification of biosynthetic gene clusters for novel secondary … methods in the past decade, researchers have uncovered genomes for just a small fraction of Earth’s microbial … “While these draft genomes are imperfect, they can still reveal a lot about the biology and diversity of uncultured …
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JGI Contributes Nine to 2022 Highly Cited Researchers List
… influence in their chosen field or fields through the publication of multiple highly cited papers during the last … the JGI is sequencing thousands of bacterial and archaeal genomes from diverse branches of the Tree of Life.  Its … oceans.   The reasons behind C-fern’s size and complexity revealed : C-fern is typical of most ferns in many ways, …
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Niche of harmful alga Aureococcus anophagefferens revealed through ecogenomics
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JGI Workshops at PAG
… Jan. 12 workshop: The Rapidly Expanding Genomics of Algae   With advances in genomics technologies, keen … of algae, and sampling of the length and breadth of algal diversity, the numbers of sequenced algal genomes, and the quality of those genomes, is rising. The …
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