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From Intern to Published Scientist: The Journey of a JGI-UC Merced Intern
For many scientists, the culmination of their work into a written report that is published in a … current PhD student, reached this milestone with a recent publication in Molecular Biology and Evolution . “It’s my …
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Phylogenomic analysis of 589 metagenome-assembled genomes encompassing all major prokaryotic lineages from the gut of higher termites
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Jeremy Schmutz
Schmutz’s involvement with the DOE Joint Genome Institute dates back to 1997, when he was working for the Stanford … for de novo sequencing of eukaryotic organisms from simple yeasts to large vertebrate genomes.  For the past 13 … Award … Plant Science Program … Education … Selected Publications … Awards and Honors …
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Nigel Mouncey
Dr. Mouncey joined the DOE Joint Genome Institute in 2017 as the fourth Director in its 27-year history. He has a wealth of managerial experience from almost 20 years in the … World Bio Markets Bio-based Business Person of the Year Publications Committee Chair (2016- ), Society for …
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Frequently Asked Questions: Proposal Submission
See below for a list of Frequently Asked Questions about our proposal submission … proposals are subject to JGI policies on Data Release and Publication .   Except for applicants to the CSP New …
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Axel Visel
Dr. Visel joined the DOE Joint Genome Institute in 2010. As the Deputy for Science Programs, he focuses on the … Computational Biology , Nucleic Acids Research . Over 80 publications in peer-reviewed journals including Nature, … F, Afzal V, Ren B, Rubin EM, Pennacchio LA (2009). ChIP-seq accurately predicts tissue-specific activity of enhancers . …
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Phylogenomic Analyses of Non-Dikarya Fungi Supports Horizontal Gene Transfer Driving Diversification of Secondary Metabolism in the Amphibian Gastrointestinal Symbiont, Basidiobolus
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Cataloging the Microbes that Manage the Health of River Systems
Database provides details on river microbes in 90% of US … In a recent Nature paper , researchers describe a dataset of microbial genomes sampled from rivers covering 90% of the …
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Busting the Unbreakable Lignin
New evidence shows anaerobic fungi can degrade the hardiest of plant components … of naturally modifying lignin.  The Impact Traditional methods for breaking down biomass use aerobic methods (those … wondering if perhaps the accepted narrative wasn’t quite accurate, and maybe anaerobic fungi living in soils or the …
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Picking Up Threads of Cotton Genomics
Analysis reveals cotton genome stability across global … consortium of researchers that sequenced and assembled the simplest cotton genome ( G. raimondii ) several years ago. … Science “The results described in this  Nature Genetics publication will facilitate deeper understanding of cotton …
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JGI Early Career Researchers Featured in mSystems Special Issue
In a special issue of mSystems , out May 14, 2019, JGI researchers are … in an environmental sample beyond the tried-and-true method of traditional shotgun metagenomics. One approach …
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Ray Turner Completes Last Tour of Lab Duty at JGI
For the last 15 years, Ray Turner has been one constant for the Joint Genome … as a typical monthly JGI All-Hands Meeting, after a couple of perfunctory items, the agenda went off the rails – …
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