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… To provide broad plant genomic capabilities, the DOE Joint Genome Institute works in partnership with the HudsonAlpha Institute for Biotechnology, which specializes in … the JGI Plant Gene Atlas in  Nucleic Acids Research . The project spans 15 years and involves more than 17 research …

… users through a BER data ecosystem.  A data ecosystem is a connected resource where data from different organizations is discoverable and accessible. Linking the resources of powerful institutions like the JGI, KBase, NCBI, NMDC, EMSL and the Protein … specifically optimized for high-performance computing environments. …

… (CSP) call of the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … through the  CSP New Investigator call . It is the first project to have successfully evolved into a full-scale … which species of mycorrhizal fungi are important for poplar plant health, in part to learn how these species can …

… crop. In 2018, the JGI had sequenced and assembled the genomes of two varieties of a close relative and model … have also harnessed the switchgrass gardens for other projects. At the 2021 JGI Annual Meeting, David Lowry talked … a multi-year study his student conducted involving fungal rust pathogen resistance. Just as the common gardens have …

… tools and data hub for NIH program. While the microbes in, on and around Earth outnumber the stars in the Milky Way, … order of magnitude. For years, scientists at the DOE Joint Genome Institute, a DOE Office of Science user facility … Laboratory, have collaborated with global researchers on projects related to understanding how the interactions …

… Open Green Genomes hits milestone with C. richardii The Science Fern genomes are huge, and incredibly complex — making it … The work conducted by the US Department of Energy Joint Genome Institute is supported by the Office of Science of … to Z.-H.C.). B.A.A. and D.W.S. acknowledge funding for this project from the Ambrose Monell Foundation. …

… Genome annotations of two C. citriodora subspecies broaden understanding of … terpenes play key roles in plant growth, defense, and environmental interactions. Terpenes are also economically … assembly of two Corymbia citriodora subspecies variegata genomes allowed researchers to study the conservation and …

… thin vermicelli-like threads floating delicately above the leaf debris are revealed to be single bacterial cells, … appointments at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … “We started this project under the JGI’s strategic thrust of inter-organismal interactions, because large sulfur …

… over the last  25-plus years since the JGI’s inception, making it possible for researchers to get a close look … For example, with support from the  Exascale Computing Project , the JGI — along with the National Energy Research … to enable large-scale analysis. The story of a massive metagenome assembly for a time-series experiment from the …

… staff members of the US Department of Energy (DOE) Joint Genome Institute (JGI) commit to Lawrence Berkeley National Lab’s (Berkeley Lab’s) core values , which guide the … mission, we recognize success is dependent on earning the trust of our stakeholders. These stakeholders range from …

… at the University of Texas (UT) at Austin, the HudsonAlpha Institute for Biotechnology (HudsonAlpha), and the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … This means it contains more than two copies of the genome , which can have pronounced ecological and …

… to identify proteins, the team compiled DNA sequences (metagenomes) and messenger RNA sequences (transcriptomes) from … sequences assembled as part of its 1000 Fungal Genomes Project . To map microbial activity, Baldrian’s team … four specific habitats within the forest floor: the leaf litter on top of the soil, the roots of the trees, the …