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From Stress to Growth: The adaptive mechanisms of algae in changing Arctic waters
… genes drive resilience when salinity fluctuates. The Science The Arctic microalga Plocamiomonas psychrophila can … environment of comparable salinity.  Researchers collected samples at several points in time to assess nutrient … recorded. Samples were taken again at two, six, 12 and 24 hours. By the 24-hour mark, these algae showed significant …
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Purifying the Impure: Sequencing Metagenomes and Metatranscriptomes from Complex Animal-associated Samples
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JGI announces 2024 New Investigator portfolio
The JGI is eager to work and share our tools with a widening circle of researchers. That’s why … — through the New Investigator call under our Community Science Program . Below find a list of researchers whose … for this annual call; the next deadline for proposal submission is October 4, 2024, for inclusion in the December …
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Engagement Webinar: How to Successfully Apply for a CSP Proposal
… held a JGI Engagement: Pro Tips for Successful Community Science Program (CSP) Applications Webinar inviting … Investigator call for proposals.  Tips: Contact us with your questions ([email protected]) Carefully read … There’s multiple ways to can mix and match synthesis, metabolomics, sequencing. The only requirements are that you …
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Broad Genomic Sampling Reveals a Smut Pathogenic Ancestry of the Fungal Clade Ustilaginomycotina.
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Hymenobacter artigasi sp. nov., isolated from air sampling in maritime Antarctica.
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The INSIG2 rs7566605 genetic variant does not play a major role in obesity in a sample of 24,722 individuals from four cohorts
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Enlarging Windows into Understanding Gene Functions
… of the alphabet. Yet the specific sequence of these four letters represents an organism’s genetic code, or … encoded in the genome sequence is part of the integrative science mission of the U.S. Department of Energy (DOE) Joint … as DNA affinity purification sequencing or DAP-seq. The technology was developed by Ronan O’Malley , who leads the …
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iPHoP: A Matchmaker for Phages and their Hosts
… computation helps fill in what cultivation can’t. The Science At first, viruses are merely toolkits. To do … nutrient cycling, or carbon sequestration. Summary Existing programs use a variety of approaches to match a virus with a … many more likely hosts for viruses in human microbiome samples, reflecting factors such as the quality and number …
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How to Target a Microbial Needle within a Community Haystack
… microbes from complex environmental samples. The Science A team led by researchers at the Max Planck … DNA could be sequenced. Their protocol,  detailed in the journal  Microbiome , combines multiple techniques and was … Opportunity Program . The ETOP helps researchers develop technology that can then be made available to JGI users in …
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Toward More Reproducible, Reusable Stable Isotope Probing Experiments
… to go beyond understanding which microbes are present in a sample, to generate data about which organisms are active, … process. The isotope labeling incubations can take hours to months, followed by weeks of tricky, laborious lab … Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National …
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A Natural Mechanism Can Turbocharge Viral Evolution
… allows microbes to adapt to changing environments. The Science The first step in the deadly dance between a virus … in single microbial and viral genomes, as well as genomes sampled all at once from the same environment, called … under contract no. DE-AC02-05CH11231. This research used resources of the National Energy Research Scientific Computing …
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