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Cultivating Symbiotic Antarctic Microbes
… From our partners …
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Igor Grigoriev
… Dr. Grigoriev engaged thousands of researchers in genome projects and organized numerous genomics workshops. … et al (2021) PhycoCosm, a comparative algal genomics resource.  Nucleic Acids Res. 49(D1):D1004-D1011 Swift et al … of Vascular Plants.  Science, 2011; 332: 960-963. Colbourne JK et al. The ecoresponsive genome of  Daphnia pulex …
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Ancient Algae Reveal Secrets of Plant Evolution
… relative,  Zygnematophyceae , scientists have enhanced our understanding of how early plants transitioned from … able to grow in marginal lands and with minimal resources. Enabling the use of non-arable land for biomass … (Berkeley Lab), scientists sequenced the genomes of four  Zygnematophyceae algae, which were isolated from …
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Jeremy Schmutz
… by the DOE Joint Genome Institute and the collaborative projects funded through the CSP program. In addition to … 2023. JGI plant gene atlas: an updateable transcriptome resource to improve functional gene descriptions across the … Nature 590: 438-444. Mamidi, S et al. 2020. A genome resource for green millet Setaria viridis enables discovery of …
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Plotting a Model for Virus-Host Warfare Deep Below Ground
… releasing fresh organic carbon which can serve as a food source for other microbes into the environment. Summary In J. … dubbed these viruses Altivir, finding them in three of the four subsurface ecosystems known to host Altiarchaea. The …
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Frederik Schulz
… to the JGI user community and supports various user projects in the Microbial Program. In an LDRD-funded … Senior Editor, ISME Journal LBNL LDRD (Soil Protists) FY2022 LBNL LDRD (Viral …
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Corymbia Genome Expands Terpene Synthesis Knowledge
… between the two species. The work was reported in the journal Heredity . In order to understand the gene expression … and abiotic stress responses. Overall, this study improves our understanding of the terpene synthase gene family and …
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JGI@25: Tracking & Subduing the Plague of California’s Oak Woodlands
… revisited a number of notable achievements that showcase our collaborations and capabilities to enable great science … to the public in a highly-cited 2006 publication in the journal Science . This provided a framework essential to …
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A Plant Root Atlas for Tracking Developmental Trajectories
… datasets. The work was  recently published in the journal  Developmental Cell and provides a community resource that could help researchers track cell development and … Phytozome and will be available for future single-cell projects.” The Berkeley Lab  Biosciences Area has been …
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FICUS Webinar: “Shining a Light: Advanced Photon Source Capabilities for FICUS Research”
… how researchers can gain access to the Advanced Photon Source (APS) at Argonne National Laboratory when applying to … Science (FICUS) Call Karolina Michalska , Advanced Photon Source at Argonne National Laboratory: “Advanced Photon Source Capabilities for FICUS Program” Sabeeha Merchant , …
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GenomeOcean Leverages AI to Decode Nature’s Secret Language
… the human language—are well positioned to help enhance our understanding of life’s genomic code, advancing DOE … strategy. Imagine you’re at an arcade and need to convert your money into tokens to play the various machines. You’d go … many terabases of sequences from large metagenome projects — ultimately assembling over 220 Tb of sequences …
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Toasting to the 2020 JGI-UC Merced Summer Internship Program
… in some cases daily, check-ins with their mentors to ensure projects progressed despite the challenges of remote work. … with the UC Merced students is a fantastic component of our work,” said Nigel Mouncey, JGI Director. “This year is …
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