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Engagement Webinar: Harnessing JGI’s Metabolomics Capabilities
… The JGI Engagement Webinar held November 5, 2020 (watch the  video below, captions are available) spotlighted … see this  Metabolomics Data Analysis – Tips from Users page.  Q:  Is the metabolic study able to build a profile … and environmental characterization and cleanup. The JGI provides integrated high-throughput sequencing and …
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A Step Toward Controlling Soybean Rust
… The United States  is the world’s leading soybean producer , and soybeans … as 90 percent. As part of the DOE Joint Genome Institute’s  2016 Community Science Program portfolio , Sebastien … to counter soybean rust disease. Soybean itself is a  JGI Flagship plant genome , and JGI  published its genome …
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CSP Functional Genomics
… Functional Genomics call is to enable users to perform state-of-the-art functional genomics research and to help them … function.  The emphasis is on projects leveraging JGI’s Biodesign and ‘omics capabilities to enhance … without the capabilities and expertise available at the JGI. Proposals to this call may be submitted to the JGI at …
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Natural Prodcast Episode 11: Marnix Medema
… to the Department of Energy Joint Genome Institute’s Natural Prodcast, a podcast about natural products and the … of question have you applied them? Dan Udwary: Well, at JGI we have the Atlas of Biosynthetic Clusters . And this is … into IMG’s data. IMG being Integrated Microbial Genomics at JGI, a large data set of bacterial genomes. And so yeah, we …
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A More Intuitive Phytozome Interface
… Highlighting the latest interactive version of the JGI’s plant data portal. On … over 5 years, provides users with the genome browsers, gene pages, search, BLAST and BioMart data warehouse interfaces … and environmental characterization and cleanup. The JGI provides integrated high-throughput sequencing and …
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Spacer2PAM: A computational framework to guide experimental determination of functional CRISPR-Cas system PAM sequences
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Tanja Woyke
… After studying the mechanism of action of antifungal natural products and their derivatives during her Ph.D. in Microbiology at the Eberhard … of User Program position in 2021. In addition to her JGI appointment, she also holds an Adjunct Scientist … learn more about the program's areas of focus, major initiatives and more.  …
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2025 NeLLi Symposium
…   Registration has closed   Registration fees: Regular attendees  (LBNL and external): $400  Industry: $450  … The NeLLi Symposium will take place at The Marjorie Barrick Museum of Art at the University of Nevada, Las Vegas. The poster session … Interested NeLLi Symposium and Jamboree attendees can also register for activities scheduled outside …
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Informatics Advisory Committee
… The IAC is chartered by the JGI Chief Informatics Officer (CIO) and reports to the JGI Director. The IAC is chartered to render advice, …
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New Lineages of Life Group
… Our research is focused on the discovery and characterization of novel bacterial, archaeal and eukaryotic microbes and viruses in environmental sequence data. We use multi-omics (metagenomics, metatranscriptomics, single cell genomics and phylogenomics) … Exploring the fascinating world of giant viruses, which challenge our …
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New and Improved: Eucalyptus Reference is Now Accessible
… compared to the 2014 Eucalyptus grandis reference genome that has been widely adopted. The new genome assembly resolves … The new improved genome assembly generated through the JGI’s Community Science Program will help support targeted … help from researchers at the DOE Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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Notes on the Microbial Diversity of Puerto Nuevo’s Coastline
… in Mexico. While conducting early field studies related to her thesis on cone snails, UC Merced graduate student Sabah Ul-Hasan and alumnus of the JGI-UC Merced Genomics Internship Program, first sampled the area in summer 2016.  She described the microbial diversity patterns of …
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