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VEGA Symposium
Hosted by the JGI and co-organized with NIST,  the goal of the Viral EcoGenomics & Applications (VEGA) symposium was … Confirmed Speakers Ishi Keenum , Michigan Technological University Martial Marbouty , Institut Pasteur Ken Stedman, Portland State University Luke Hillary, UC Davis Samuel Díaz-Muñoz, UC …
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Refining the Process of Identifying Algae Biotechnology Candidates
… well ] The Science The recipe for growing algae as a source of sustainable biofuels seems fairly simple: place these algae in a container … national laboratories are working toward that goal. In a collaborative effort published in Communications Biology , a …
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Marine Microbe Contains Multitudes
… microbial genomics reveals one bacterial species is made of four ecologically distinct groups with different … to the blue-lit twilight zone, to the continuous pressure of the dark abyss, 4000 m (2.5 miles) deep. Scientists have … — then a postdoctoral associate in Ed DeLong’s group at the University of Hawaii at Manoa — and colleagues were able to …
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Evolution of a Fungal Gene Expression Regulator
Describing the largest analysis to date of the modified DNA base 5mC variations in fungi. The … Ecology & Evolution , a team led by Robert Schmitz at the University of Georgia and including JGI researchers … and Georgia Genomics and Bioinformatics Core (GGBC) at the University of Georgia provided sequencing and computational …
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The More the Merrier: Making the Case for Plant Pan-genomes
… plants; at least once during their evolution, the genomes of flowering plants multiply. Over time, plants lose many … de Aula Dei (EEAD-CSIC) (Spain); Fundación ARAID (Spain); University of California, Berkeley; Gregor Mendel Institute … Université d’Evry Val d’Essonne (UEVE) (France); Zhejiang University (China); Universidad de Zaragoza-Escuela …
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JGI@25: Tracking & Subduing the Plague of California’s Oak Woodlands
In honor of the JGI's 25th anniversary in 2022, we have revisited a … led by the JGI and Virginia Polytechnic Institute State University, was released to the public in a highly-cited … in the journal Science . This provided a framework essential to understanding how these plant pathogens cause …
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Calculating the Costs of Multiple Switchgrass Gene Copies
… adapted to expand its habitat range. But at what cost?  A collaborative team led by researchers at the University of Texas (UT) at Austin, the HudsonAlpha Institute for …
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SPRUCE-ing Up Science
… his backyard in Tennessee — the birds are chirping and a soft breeze ripples through the trees in his backyard. … the HudsonAlpha Institute for Biotechnology, and Duke University, published their research related to how bacteria … help to represent their findings. “The graphics, they’re essentially distilling complex things … they really just …
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The Case for Conservation
… genome . Now, high-quality reference genome sequences of the male and female plants, each representing a single … “Why bother keeping this?” For Stuart McDaniel’s lab at the University of Florida, an answer is in sight for a similar … DEB-1239992 to N.J.W.; the Emil Aaltonen Foundation and the University of Turku to S.O.; and NSF DEB1541506 to J.G.B. …
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You Can Move, But You Can’t Hide
… to replicate themselves and spread from cell to cell. Two of the most common forms of MGEs are viruses and plasmids. … is now accessible through the National Microbiome Data Collaborative’s EDGE platform. The Impact In order to gain … can process large datasets, geNomad is poised to become an essential tool for researching global viral diversity. …
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Matt Blow
… from the Wellcome Trust Sanger Institute and Cambridge University University in 2005, where he studied RNA editing and cancer … function in bacteria. Since 2016, he has been the lead of the User Support Analysis group. The group performs …
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Effects of Polar Light Cycle on Microbial Food Web
Populations of Antarctic lake microbial communities change with the … with light availability. A long-running time-series study offers a first glimpse into a full season’s cycle of this … The study was led by Rick Cavicchioli, professor at the University of New South Wales, Australia, and included …
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