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The ectomycorrhizal fungus Paxillus involutus converts organic matter in plant litter using a trimmed brown‐rot mechanism involving Fenton chemistry
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Inspiring STEM Careers Through a Hands-on Everglades Microbiome Study
Journal publication caps JGI pilot project with fledgling Florida high school scientists. The Florida Everglades … cattails. In 2018, the US Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … in the journal  Environmental Microbiome . “Before JGI was involved, I was not sure we could even complete a full …
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JGI@25 RECAP: 2022 Annual Meeting features historical perspectives on JGI’s 25 years
… the JGI’s 25th anniversary celebration, the 2022 Annual Meeting featured speakers who shared a look back at the JGI’s … from its beginnings in the sequencing for the Human Genome Project out to the future of the institution. Their … Patrinos shared nine lessons learned from his time involved in the project, mostly focused around how to best …
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JGI@25: Building a Better Bean
In honor of the JGI's 25th anniversary in 2022, we have … of researchers led by Jeremy Schmutz of the JGI and the HudsonAlpha Institute for Biotechnology; Phil McClean of … said. “…It was incredibly expensive and time-consuming and involved a lot of different players and researchers across …
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Single Cell Research Group
Research in the Woyke laboratory focuses on the utility of … in the strongly biased representation of sequenced genomes in the public domain, the bulk of which belong to … A., Hadjithomas M., Varghese N. J., Paez-Espino D., Hungate project, collaborators Perry R., Henderson G., Creevey C. …
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The Expanding Universe of Methane Metabolisms in Archaea
Metagenome-assembled archaeal genomes provide new insights into … final step in methanogenesis, or MCR-like complexes, likely involved in short-chain alkane oxidation. “We propose a …
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NeLLi — Symposium on New Lineages of Life
The DOE Joint Genome Institute hosted the hybrid “NeLLi 2023 Symposium” delving … Program Tanja Woyke, Microbial Program Robert Bowers,  User Project Coordination Rekha Seshadri,  Functional Annotation …
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Enlarging Windows into Understanding Gene Functions
JGI innovates protocol revealing how genetic variations in … four letters represents an organism’s genetic code, or genome, which underlies physical features and functions. … Program (CSP) focuses on a fungal comparative ENCODE project known as FUNCODE. “We noticed a few years ago that …
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A novel open-source cultivation system helps establish the first full cycle chemosynthetic symbiosis model system involving the giant ciliate Zoothamnium niveum
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A Shrubbier Version of Rubber
… one tree species: Hevea brasiliensis . It’s great at producing latex that becomes rubber, but it’s vulnerable to disease and climate shifts. So researchers are looking into a desert shrub that’s native to North America: … episode was made in collaboration with our friends at the HudsonAlpha Institute for Biotechnology.       …
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Expanding Virophage Diversity
Virophages are small viruses with double-stranded DNA genomes that co-infect eukaryotic cells along with giant viruses. Virophages … minor capsid proteins (MCP and mCP, respectively), ATPase involved in DNA packaging, and PRO, a cysteine protease …
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Frederik Schulz
Dr. Frederik Schulz joined the DOE Joint Genome Institute in 2016 and is leading the New Lineages of … to the JGI user community and supports various user projects in the Microbial Program. In an LDRD-funded …
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