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Our research is focused on the discovery and characterization of novel bacterial, archaeal and eukaryotic microbes and viruses in environmental sequence data. We use …

… biosynthetic gene clusters.  The Science Microbial secondary metabolites, those molecules not essential for growth … may now be easier to characterize following a proof-of-concept study in which researchers paired CRISPR and CRAGE … to integrate large genetic payloads directly into diverse microbes. Combining CRAGE with CRISPR provides researchers …

In honor of the JGI's 25th anniversary in 2022, we have … of course, the cells of other organisms. As they infect microbes like bacteria, algae and protists, all kinds of … at the JGI led a team that combed datasets from around the world, finding over 125,000 partial and complete viral …

The User Support Analysis group provides computational analysis for new technology development and JGI user science projects. We perform analysis for diverse experiment types, … Our group also performs ‘proof-of principle’ research projects to demonstrate new genomic capabilities. Our group …

To set up flexible, repeatable experiments on plants and microbes, Trent Northen’s group at Berkeley Lab created a … small plastic growth chambers let researchers around the world compare their work consistently. And EcoFABs also work …

… the distributed and dynamic metabolite networks of environmental microbes and how they transform their environment. Research Team    … For further details, please reach …

… genus Lentinula, which have evolved to decompose hardwoods on every continent besides Europe and Antarctica. A  new … takes a  genomic look at Lentinula samples from around the world. By complete sequencing of 24 new mushroom genomes, … award 0000238431 to D.H., the GENOBIOREF (BIO2017-86559-R) project of the Spanish Ministry of Science and Innovation …

… the New Lineages of Life Group. His research is focussed on the discovery of novel bacterial, archaeal and eukaryotic microbes and viruses in environmental sequence data. Dr. … to the JGI user community and supports various user projects in the Microbial Program. In an LDRD-funded …

… reveals the microbial community involved in a bioremediation effort. The Science In 1999, the Environmental Protection … to bioremediation efforts for decades. Identifying resident microbes that can help bioremediate toxic substances has led … to analyze the resulting metagenomic data. (Data from the project are available on the  JGI Genome Portal .) The team …

… internship in the summer of 2020, it was a time where the world literally stopped. …

… (JGI). Researchers from the DOE Systems Biology Knowledgebase (KBase), the National Microbiome Data Collaborative (NMDC), and Berkeley Lab … users who made use of our data. We completed 39,870 projects in FY24 We generated 871 Terabases of sequence We …

Call FICUS CSP Large Scale CSP New Investigator CSP Functional Genomics Status CLOSED CLOSED ONGOING ONGOING Who Should Apply? Investigators with research projects that integrate the expertise and capabilities of … user facilities Investigators with DOE mission-relevant projects that call for expansive sequencing, synthetic …