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Len Pennacchio
… In 2003, Dr. Pennacchio joined the DOE Joint Genome Institute and has focused on … He holds joint appointments as a Deputy Director at the DOE Joint Genome Institute, Senior Scientist at Lawrence … Genomic Technologies. oClick to learn more about the offerings and capabilities we offer JGI users to help advance …
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Creating an Energy Market for Miscanthus
… and a potential fuel for the future. But, to be competitive in the market, both energy policy and Miscanthus will need some upgrades. In this episode, hear from scientists working on understanding Miscanthus biology and the economic …
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Environmental Genomics Group
… Research in the Eloe-Fadrosh group focuses on using genome-resolved metagenomic approaches to identify and characterize genomic information from uncultivated microbes and viruses. We … focuses on the assembly of metagenomic sequence data into microbial genomes, which is of fundamental value to …
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Products
… The JGI has diverse capabilities in: DNA and RNA sequencing, Sample and library preparation, Biodesign and pathway … for all proposal calls.   Please review the call language carefully to ensure that your request is appropriate for … Q1  (median/75th percentile*) DNA Synthesis Constructs <5kb in size Single gene or multiple small genes assembled to …
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Better Living Through Bioenergy
… are a way to kick our addiction to fossil fuels. In this episode, we peek into how scientists Aindrila Mukhopadhyay and Steve Singer are harnessing the …
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JGI Part of Berkeley Lab Team Awarded Best Use of HPC in Life Sciences
… Multiple 2021 HPCwire Awards ” on the Berkeley Lab Computing Sciences site. Lawrence Berkeley National Laboratory … Energy Research Scientific Computing Center (NERSC), the DOE Joint Genome Institute (JGI), and the Energy Sciences … Officer  Kjiersten Fagnan touted the long-standing collaboration between JGI and the ExaBiome team. “They …
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Computationally Classifying Fungal Lifestyles
… Machine learning methods were applied on sequenced fungal … A team led by researchers at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science … in correctly predicting plant pathogens (blue) vs saprobes (green). (From Haridas S et al.  Studies in Mycology , 2020.) …
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Exploring the Diversity of the American Prairie’s Switchgrass
… switchgrass ( Panicum virgatum ) has long been a tantalizing potential biofuel feedstock. But switchgrass has a complex genome and, as a species, encompasses dizzying diversity. So, a team of scientists made an ambitious plan to begin to link the plant’s varying traits — height, biomass, …
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Toward More Efficient Artificial Photosynthesis
… Chloroplast mimic a platform to capture and utilize carbon in a synthetic fixation cycle. The Science … Science Program (CSP) of the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science … as the US Department of Energy Joint Genome Institute, a DOE Office of Science User Facility (contract no. …
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Secrets of the Needles: What Microbes do on Conifer Leaves
… Novel study looks at microbiomes in aerial surfaces of plants and their roles in plant health … work, enabled in part by the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science … atmosphere. The team learned that some bacterial families carry genes for degrading monoterpenes such as α-pinene, as …
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Jasmyn Pangilinan
… Jasmyn provides bioinformatics tools and analysis support for user science, … a focus on metagenomes. Passionate about automation and collaboration, she works to develop and improve supporting pipeline efficiency through streamlined workflows, …
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FICUS Webinar: “Shining a Light: Advanced Photon Source Capabilities for FICUS Research”
… On February 8, 2024, the DOE Joint Genome Institute and the Environmental Molecular … Lipton , EMSL: Introduction to the Facilities Integrating Collaborations for User Science (FICUS) Call Karolina … to ask questions. Make sure the science is relevant to the DOE BER mission. …
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