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Scaling Up Existing Skill Sets
… to functional genomics. Hear from five of the Summer 2019 interns, who briefly shared their experiences below. … experience working intermediately between academia and industry, which is something I didn’t even know existed before. … JGI intern for a second time since participating in summer 2017 ( read more here on her previous experience) has …
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JGI@25: Following Fungi that Pry Apart Plant Polymers
… that will help solve energy and environmental challenges.   Usually, plants have the upper hand against any kind of … and efficiently harvest the energy they store.      Since 2012, O’Malley has worked with the JGI to understand the … natural products . Those results showed that these fungi may be able to provide tools beyond biomass breakdown, …
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Hydrogen production in photosynthetic microbial mats in the Elkhorn Slough estuary, Monterey Bay
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A One-Stop Shop for Analyzing Algal Genomes
… allows anyone to freely investigate the genes of more than 100 algae. The Science Interested in the genomes of algae? … an interactive browser that allows algal scientists and enthusiasts to look deep into more than 100 algal genomes, … study DNA methylation, which gives clues to how an organism may tune gene expression; and investigate corresponding …
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From Intern to Published Scientist: The Journey of a JGI-UC Merced Intern
… ultimate achievement. To get to this point requires rigorous research, written skill, above all else, determination. … in this publication during her summer internship in 2018. She selected one of the projects posted by JGI fungal … some delicious additions to a savory meal, while others may be useful in the biofuel and synthetic biology fields. …
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Soil virus offers insight into maintaining microorganisms
… Using the IMG/M data portal, researchers have identified a … researchers have identified a protein in soil viruses that may promote soil health. The work was enabled in part by a … three domains of life.  Using the IMG suite, JGI retrieved 142 of the GH75 AMGs, which encode enzymes that break down …
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Graduate Students Get Thesis Research Opportunity at the JGI
… at one of the DOE national laboratories or national user facilities. As a result of the latest call , a total of … were selected to carry out part of their thesis research at 12 host national laboratories or facilities between 3-12 … the terrestrial-marine interface, which at a larger scale may be applicable towards carbon, and especially methane, …
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Genome sequence of the Lotus spp. microsymbiont Mesorhizobium loti strain NZP2037
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Learning to Look
… Machine learning approach significantly expands inovirus diversity. To answer the question, “Where’s Waldo?” … for a number of distinguishing features. Several characters may be spotted with a striped scarf, striped hat, … will have all of these features. As described July 22, 2019, in  Nature Microbiology , a team led by scientists at …
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Jay Keasling
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Ben Bowen
… in mass spectrometry-centered projects, Dr. Bowen’s work focuses on developing high-performance computing workflows and … supporting the DOE’s Biological and Environmental Research user community in their bioenergy and environmental … 2024 Berkeley Lab Recognition of Excellence Award 2016 R&D 100 Winner 2014 Berkeley Lab Director’s Award for …
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Supercomputing, MetaHipMer and the Mega Dataset of Lake Mendota
… technology has changed dramatically over the last  25-plus years since the JGI’s inception, making it possible for … base pairs of sequence; by 2023, that number was almost 717 trillion. Last year, the JGI surpassed three Petabases of … lead to better predictive models of global climate. They may also provide a basic understanding of the roles …
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