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Trent Northen
… is currently a Senior Staff Scientist at Berkeley Lab. Since joining Berkeley Lab in 2008, Dr. Northen has had … through the Joint BioEnergy Institute and the ENIGMA SFA project. In 2015, he founded what is now the JGI … Northen’s research is focused on using metabolomics to link genomes with environments to understand how webs of microbes …
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Inspiring STEM Careers Through a Hands-on Everglades Microbiome Study
Journal publication caps JGI pilot project with fledgling Florida high school scientists. The Florida Everglades … email inquiries, sent through JGI’s  Integrated Microbial Genomes & Microbiomes (IMG/M) system, reached  Emiley …
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JGI announces 2024 Functional Genomics awardees
… genomics research from reseachers who translate genomic information into biological function. Through our CSP Functional Genomics call , we look for projects that will leverage the JGI’s DNA synthesis and … in support of advancing the bioeconomy.  This year’s project goals range from improving crop productivity for …
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The Case for Conservation
How sex chromosomes “older than dinosaurs” could help improve crop yields.  The Science The … heavy metal contamination, and drought. The moss genomes’ metabolic pathways could lead to the discovery of … a full third of each moss genome, and are almost four times the size of the next largest chromosome. As the study …
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A One-Stop Shop for Analyzing Algal Genomes
The PhycoCosm data portal allows anyone to freely investigate the genes of more than 100 algae. The Science Interested in the genomes of algae? You now have one place where you can … and enthusiasts to look deep into more than 100 algal genomes, compare them, and visualize supporting experimental …
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Dan Rokhsar
Dr. Rokhsar joined the DOE Joint Genome Institute in 2000 as the founding … After successful completion of the human genome project, Professor Dr. Rokhsar ’s team has continued to … and evolutionary analysis of over fifty plant and animal genomes. He currently leads the JGI’s Computational Genomics …
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Plotting a Model for Virus-Host Warfare Deep Below Ground
…   Visualizing a novel, candidate viral genome found in the deep … of countering multiple attempts at virus infections. Their genomes include short DNA sequences that code for CRISPR … (Nachwuchs-gruppe “Dr. Alexander Probst”), and the NOVAC project of the German Science Foundation (grant number DFG …
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JGI@25: Expanding Metagenomics to Capture Viral Diversity
In honor of the JGI's 25th anniversary in 2022, we have … Beginning in the early 2000s , these environmental metagenomes began to offer a window into viral existence. Along … million viral genomes, and  this most recent version is six times larger than the previous one . To identify so many …
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From Berkeley to Binghamton: Tracking Strawberry Evolution
In the summer of 2015, Adam Session was a postdoc working at … developed a method to correctly identify polyploid subgenomes without needing to know the genomes of their … specific procedure.” The rapport they built during this project and others (including the dissertation that preceded …
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For the Tiniest Archaea, A Genomic Switch of Friend or Foe
Meta-omics datasets show that CRISPR-Cas systems determine mutualism or parasitism between some archaeal hosts and … are abundant and yet exceptionally small, with mini genomes to match. As a result, they cannot process all of … microorganisms had a close relationship. Then, using metagenomes and metatranscriptomes generated by the U.S. …
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10 From JGI on the 2019 Highly Cited Researchers List
… their 2019 list of Highly Cited Researchers , which includes 10 affiliated with the JGI . The 2019 list focused … of 21 fields appear on the 2019 list. Congratulations to: Project Manager Kerrie Barry, Cross-Field Category Fungal … a long-term project to sequence, annotate and analyze the genomes of more than 300 Aspergillus Go here to learn more …
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A Natural Mechanism Can Turbocharge Viral Evolution
Understanding how a fundamental mechanism of evolution allows microbes … ago, a team discovered a group of viruses that had in their genomes a surprising tool: a “diversity generating … (DP150100244) and the Australian Antarctic Science program (project 4031). The work in the Hallam Lab was performed …
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