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Susannah Tringe Named 2020 DOE Lawrence Award Recipient
… Congratulations to Susannah Tringe , one of eight scientists and engineers who received … highest honors! Tringe, a microbiologist, was recognized for “advances in sequence-based studies of microbial … and water recycling.” Tringe is the interim director of Berkeley Lab’s Environmental Genomics and Systems Biology …
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2022 Progress Report
… Pictured is a timelapse of the Integrative Genomics Building (IGB) seen above is home to … the National Microbiome Data Collaborative (NMDC), and Berkeley Lab Biosciences Area are also co-located in the … (JGI), a DOE Office of Science user facility at Lawrence Berkeley National Laboratory (Berkeley Lab), is to become …
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A User-Centered Approach to Accessing JGI Data
… the plant portal  Phytozome . Now the portal offers a way for users to more easily access public data sets through a … common set of metadata. For Steve Wilson, JGI’s Systems Engineering group lead, the Data Portal reflects a structural … release, have completed their embargos, and numerous other requirements. Data that passes through a kingdom portal …
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JGI Earth Month: Healthy Streams, Nutritious Microbes?
… In April 2020, we mark both the 50th celebration of Earth … relevant to living on a changing planet. Transcript for Audio Two special days occur in April: the 50th … from Ed Hall, an ecologist at Colorado State University in Fort Collins. He’s part of a JGI-supported project studying …
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JGI@25: The Little Alga That Could
… to those who study it) a powerful reference organism for studying photosynthesis and cell motility. It’s also a … and Sabeeha Merchant of UCLA. Merchant is now at UC Berkeley and also a faculty scientist in the Berkeley Lab … gene names. Sean Gallaher, also with Merchant’s lab and second author on the paper, studied viral genetics and gene …
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Genetic Analysis of Physcomitrella patens Identifies ABSCISIC ACID NON-RESPONSIVE, a Regulator of ABA Responses Unique to Basal Land Plants and Required for Desiccation Tolerance
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Enlarging Windows into Understanding Gene Functions
… JGI innovates protocol revealing how genetic variations in … array of combinations, are unremarkable, save perhaps for the absence of all the other letters of the alphabet. … a DOE Office of Science User Facility located at Lawrence Berkeley National Laboratory (Berkeley Lab). And one of the …
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A More Intuitive Phytozome Interface
… Highlighting the latest interactive version of the JGI’s plant data … of 250 plant genomes and has been under active development for over 5 years, provides users with the genome browsers, … attempted to make sure users will continue to have straightforward access to all the data in Phytozome v12, and that …
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Picking Up Threads of Cotton Genomics
… Analysis reveals cotton genome stability across global lineages . Come harvest time, the cotton fields look like … a DOE Office of Science User Facility located at Lawrence Berkeley National Laboratory (Berkeley Lab) has now … , both faculty investigators at the HudsonAlpha Institute for Biotechnology. “The goal has been for all this new …
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Applying Viral Genomics Expertise to Understanding the Human Virome
… JGI researchers lend expertise to develop tools and data hub for NIH program. While the microbes in, on and around Earth … a DOE Office of Science user facility located at Lawrence Berkeley National Laboratory, have collaborated with global … genomes and their interactions with microbial hosts. The second project, “ A consortium facilitation, coordination, …
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A New Actinobacterial Chapter in the Genomic Encyclopedia of Bacteria and Archaea
… leads to identification of biosynthetic gene clusters for novel secondary metabolites for multiple applications. The … a DOE Office of Science User Facility located at Lawrence Berkeley National Laboratory (Berkeley Lab), to fill in … a DOE Office of Science User Facility  located at Lawrence Berkeley National Laboratory, is committed to advancing …
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Bacteria and Fungi Divvy Up the Work in Forest Floor
… Bacterial enzymes play second fiddle to those from fungi when it comes to breaking … down tough plant fibers. The Science Walk in a temperate forest filled with Norway spruce trees, and microbial … a DOE Office of Science User Facility located at Lawrence Berkeley National Laboratory, to create the database. JGI …
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