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Silver age of GOLD introduces new features
… matured from six projects on a spreadsheet into a flagship  genomic metadata repository, making curated microbiome … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … in centigrade, and more.  The four level project organization system implemented in GOLD consist of: Studies, …
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Taking Stock of the Known and Unknown Microbial Space
… Metagenomic datasets could help map out microbial diversity … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … assesses what fraction of the microbial diversity we know about, and proposes a path forward to curate and cultivate …
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Building Wet and Dry Lab Skills
… funded by a DOE training grant.  Building off the previous year’s project, undergraduate interns Tamyra Long and … mentors Yi Zhai and John Vogel from the Plant Functional Genomics Group to study the effects of  Brachypodium … the Oakland soccer club this summer.  Want to learn more about their experience? Watch the short video below:  Video …
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BdERECTA controls vasculature patterning and phloem-xylem organization in Brachypodium distachyon
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Pinning Down a Piece of Photosynthesis
… an array of experiments at universities and national user facilities, researchers found that this protein detects … we were able to work with on this project to ask questions about structure and function,” Blaby-Haas said.  Looking at … what is now the  Community Science Program Functional Genomics proposal call, the JGI synthesized hundreds of  …
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JGI Workshops at PAG
… Jan. 12 workshop: The Rapidly Expanding Genomics of Algae   With advances in genomics technologies, keen interest in the bioenergy and … genomes, is rising. The purpose of this Workshop is to illustrate the expansion of this field and bring it to the …
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Model Fern Reveals Insight into DNA Thievery in Ferns
… well as the evolution of seed plants, the fern’s distant cousin. Ceratopteris richardii, or C-fern, specifically has … for 35 species representing all major evolutionary lineages in the land plant tree of life. Ultimately, the … of plant-based biofuels and bioproducts. ( Learn more about OGG in  this episode of to the JGI podcast Genome …
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JGI announces 2025 Functional Genomics awardees
… from left: [Above] Hao Chen, Matthew Cope-Arguello, Theophilus Olufemi Isimikalu, Todd H. Oakley, BJ Philmus and Aaron … the JGI accepts proposals for state-of-the-art functional genomics research from scientists who translate genomic … integrate cutting-edge genomic data with predictive modeling and bioengineering to advance U.S. energy independence …
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Eelgrass Proves to Be Much Younger Than We Thought
… Recent study shows eelgrass has been around about 2.5 million years less than previously believed.  The Science Eelgrass, one of the most … in the ocean. In addition to providing a more detailed timeline of eelgrass’s evolution, the study also shows the … and by a grant to J. Eisen, J.J.S. and J.L.O. from the US Department of Energy Joint Genome Institute Community …
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Axel Visel
… in 2010. As the Deputy for Science Programs, he focuses on the development and implementation of strategic … of vertebrate genomes, which led to the discovery of thousands of genetic switches implicated in developmental and … the JGI's Deputy for Science Programs. Click to learn more about our seven science program — their areas of focus, …
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Open Frameworks Training the Next Generation of Scientists
… Educational training technologies provide opportunities for students and … higher education that develops skills in fungal biology and genomics.  Myco-Ed :  The Mycological Curriculum for … participants. Over the past two years, Myco-Ed has been used in 15 individual classrooms across the country, …
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Direct Comparisons of Illumina vs. Roche 454 Sequencing Technologies on the Same Microbial Community DNA Sample
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