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… New genomes highlight the diversity of white rot fungi in the … mushrooms are white rot fungi, belonging to an elite group of decomposers that can break down all of wood’s … This research was supported by the NSF awards DEB- 1456588 to D.H. and DEB-1442113 to A.R., the Department of Energy award 0000238431 to D.H., the GENOBIOREF …

… genome . The Science Most species are diploids and have two sets of chromosomes, one from each parent. In contrast, many … more than 100 chromosomes; assembling a sugarcane genome is incredibly complex given its estimated size of 10 billion … This work was supported by the International Consortium for Sugarcane …

… Novel study looks at microbiomes in aerial surfaces of plants and their roles in plant health and environmental … focused on the conifer needle microbiome. The phyllosphere, which is known as the aerial surface of plants, is a … their diverse genomic capabilities. Summary In a project supported by the JGI Community Science Program, University of …

… A collaborative team led by Hao Tan from the Sichuan Academy of Agricultural Sciences in China and involving Francis … a DOE Office of Science User Facility,  reported on just how morel fruiting is triggered when nutrients are acquired … morels fruit under artificial environments, a technique to supply exogenous nutrients was developed. The exogenous …

… Before 2006, Olpidium was one of the many obscure fungi of Chytridiomycota (the … al . In both studies, however, Olpidium was unexpectedly grouped with non-flagellated terrestrial fungi, but not with … National Laboratory, is committed to advancing genomics in support of DOE missions related to clean energy generation …

… For many scientists, the culmination of their work into a written report that is published in a scientific … over a billion years old. It’s an insanely diverse group of organisms that include some delicious additions to a …

… Machine learning methods were applied on sequenced fungal genomes to classify gene families. The Science As a proof of concept, researchers developed an algorithm that … was over 95% successful at classifying the fungal genomes Support Vector Machine (SVM)-based prediction of lifestyle …

… Genomes from uncultivated bacteria offers clues to ancestral bacteria’s energy sources. More than two billion years ago, cyanobacteria acquired the ability to … fellow Paula Matheus Carnevali was working with a group of metagenome-assembled genomes (MAGs) dubbed …

… Journal publication caps JGI pilot project with fledgling Florida high school scientists. The Florida Everglades evokes images of fanboats skimming over swamps, while alligators peer … sure we could even complete a full project. Every other group I contacted was happy to offer advice but declined to …

… JGI-led team significantly expands the global diversity of large and giant viruses. While the microbes in a single … belong to the nucleocytoplasmic large DNA viruses (NCLDV) supergroup. The expansion of the diversity for large and … co-cultivated with amoeba or with their hosts, though metagenomics is now making it possible to seek out and …

… In   April 2020, we mark both the 50th celebration of Earth Day on April 22, … in one of those counties. The shelter-in-place order has since been extended statewide. In this brief captioned video, … National Laboratory, is committed to advancing genomics in support of DOE missions related to clean energy generation …

… On July 6, scientists from Lawrence Berkeley National Laboratory (Berkeley Lab) and other … insights from metagenomic data. In deep learning, a branch of machine learning, data is passed through algorithms … protein sequences. Sevim is part of the JGI Genome R&D Group and is one of more than 100 scientists and systems …