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… and help them digest their last leafy meal. In their evolutionary history, these fungi branched off early from aerobic … called natural products . Yet, combing through the genomes of four anaerobic fungal species has revealed, for … first author Candice Swift — verified that the fungi expressed biosynthetic gene clusters, which are “building …

… of California, Berkeley used a multi-omics approach to reconstruct and model gene regulatory pathways used by the … researchers at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … project, which is aimed at determining the activity, expression and regulation of protein-coding genes. This first …

… Protein annotations provide insights into environmental tendencies The Science The  Metagenome Stability Diagram — a tool within the Integrated … Neighbor (KNN) Classification. LDA is a supervised data compression technique that was used to take the complex, … The work conducted by the US Department of Energy Joint Genome Institute ( https://ror.org/04xm1d337 ), a DOE Office …

… researchers have identified a virus protein tied to carbon cycling.  The Science Through a collaborative effort, … data portal of the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … were retrieved using the  JGI’s Integrated Microbial Genomes & Microbiomes (IMG/M) data portal. The IMG suite is …

… RIViT-seq technology could speed up associating transcription factors with their target genes. The Science Regulons are … in Streptomyces coelicolor . The Impact As an integrative genome science user facility, connecting genes to functions … for growth and survival across various environments are expressed when their functions are needed. Data yielded …

… Congratulations to the 2021 Highly Cited Researchers at the … team that combined field data with a reference switchgrass genome to associate climate adaptations with switchgrass … of webinars featuring aspects of the Integrated Microbial Genomes & Microbiomes (IMG/M) Nikos Kyrpides was part of an …

… In honor of the JGI's 25th anniversary in 2022, we have … coherent pieces called contigs — into genes and even into genomes — from these environmental samples,” said Matthias … how JGI data supports higher education in this JGIota , a Genome Insider podcast minisode.)  “The ultimate target has …

… Interns contributed to a number of projects, from refining lab … has closed at the U.S. Department of Energy (DOE) Joint Genome Institute, a DOE Office of Science User … Asaf Salamov, Igor Grigoriev Project:  Training new JGI genomes with Tiberius Brandon Imstepf Mentor: Brian Bushnell …

… Congratulations to the proposers of the 19 proposals selected for the … Program call of the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National Laboratory (Berkeley Lab). “We’re very excited to start …

… Researchers start pinning down how a fungal symbiont spurs growth of poplar, a potential biofuel feedstock.   … what happens to the tree’s physical traits and gene expression when the fungus is present. The Impact Black … partnered with the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User …

… number of notable achievements that showcase our collaborations and capabilities to enable great science that will help solve energy and environmental challenges.   Usually, plants have the upper hand … against any kind of biomass breakdown. They’ve spent millions of years evolving tactics against potential threats. …

… Congratulations to US Department of Energy (DOE) Joint Genome … Roux leads the Viral Genomics group within the JGI Metagenome Program, and coordinates the development of the virus …