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… data modeling, and biological data management. She was one of the co-authors and key developers of the Object-Protocol … data management infrastructure of the Integrated Microbial Genomes (IMG) family of systems. Before joining LBNL in … et al. IMG/VR v4: an expanded database of uncultured virus genomes within a framework of extensive functional, …

Understanding how a fundamental mechanism of evolution allows microbes to adapt to changing … ago, a team discovered a group of viruses that had in their genomes a surprising tool: a “diversity generating … support from the EMERGE Institute (NSF #2022070). Sequencing of the Stordalen Mire samples used herein was …

Basepairs, A Vision for Integrative and  Collaborative Genome Science” – through early introduction to the … to further develop a more diverse and inclusive pool of talent for career opportunities at JGI and Berkeley Lab. …

… works on this alga, how researchers managed to sequence its genome, and what it has to teach us about other organisms – … in the Environmental Genomics & Systems Biology Division of the Berkeley Lab Biosciences Area.] …

A collaborative team led by Geoffrey Schiebinger at the University of British Columbia, … scientist at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … and cleanup. The JGI provides integrated high-throughput sequencing and computational analysis that enable …

A tall native plant of the North American prairie, switchgrass ( Panicum virgatum ) has long been a tantalizing potential biofuel feedstock. But switchgrass has a complex genome and, as a species, encompasses dizzying diversity. …

… for User Science (FICUS) program, two Department of Energy (DOE) Office of Science national user … Molecular Sciences Laboratory (EMSL) and the  DOE Joint Genome Institute (JGI)—have selected 11 proposals for … and cleanup. The JGI provides integrated high-throughput sequencing and computational analysis that enable …

…   Join the Joint Genome Institute (JGI) and the Environmental Molecular … to stay informed … The JGI and EMSL are U.S. Department of Energy (DOE) Office of Science national scientific user facilities …

A two-day kick-off meeting held at Lawrence Berkeley National Laboratory … Research Center One Health Ruhr (OHR), and the DOE Joint Genome Institute (JGI), Molecular Biophysics and Integrated … and cleanup. The JGI provides integrated high-throughput sequencing and computational analysis that enable …

Lake Mendota sits right next to the University of Wisconsin, Madison. And Trina McMahon's lab has been … So a few years ago, when they set out to analyze 500 metagenomes, it was the biggest project the JGI had ever put … In this episode: the software evolution that made metagenome assemblies like this possible. …

Interactions Within Ecosystems Latest portfolio of approved proposals highlight biodiversity and how … (CSP) call of the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … international collaboration that produced the reference genome sequence for Eucalyptus grandis. Accessing recently …

… to replicate themselves and spread from cell to cell. Two of the most common forms of MGEs are viruses and plasmids. … Lead Nikos Kyrpides at the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility at … Resource (IMG/VR) , now with more than 15 million viral genomes. It was also key to developing the first version of …