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… genomics pipeline that provides JGI users access to the genomes of uncultured microbes.  His group also handles the … PNAS 113 (28), E4069-E4078 Bendall, M.L. et al. 2016. Genome-wide selective sweeps and gene-specific sweeps in …

… methodologies into workflows with the DOE Systems Biology Knowledgebase (KBase) , in collaboration with computational … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …

… $250     Industry: $700    Thanks for joining the Joint Genome Institute (JGI) and the Environmental Molecular …

… I’m Alison Takemura at the US Department of Energy Joint Genome Institute, or JGI.  Two special days occur in April: … I recently caught up with Karolina at the Plant and Animal Genomes, or PAG conference, when in-person meetings were … leaf through which carbon dioxide enters the leaf for photosynthesis.  ALISON:  Photosynthesis is what allows plants to …

… – $300 Students & Postdocs – $250   Hosted by the DOE Joint Genome Institute, the 5th Viral EcoGenomics and Applications …

… Biological and Environmental Research program, the Joint Genome Institute provides advanced genomic capabilities, …

… A new approach for improving functional annotation in fungal genomes. The Science In a proof-of-concept study, … as the 1000 Fungal Genomics Project led by the DOE Joint Genome Institute (JGI), a DOE Office of Science User … improve our understanding of fungal diversity by sequencing genomes from across the fungal Tree of Life, but they also …

… ago, a team discovered a group of viruses that had in their genomes a surprising tool: a “diversity generating … by scientists at the US Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science user … these DGRs. DGRs were found in single microbial and viral genomes, as well as genomes sampled all at once from the …

… Micro-Scale Applications head Rex Malmstrom and Metagenome Program head Emiley Eloe-Fadrosh outline more … processes. A third approach steps away from reconstructing genomes directly from the environment and focuses on … planet’s viral diversity has advanced drastically, aided by genome assembly from metagenomes. This is a critical step …

… of scientists at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … through the publicly available  Integrated Microbial Genomes & Microbiomes (IMG/M) database, they successfully crafted the Novel Metagenome Protein Families (NMPF) Catalog.  “We can now analyze …

… biologist at the US Department of Energy (DOE) Joint Genome Institute (JGI), presented on generating vector … to vectorize protein sequences. Sevim is part of the JGI Genome R&D Group and is one of more than 100 scientists and … contigs (inferred chromosomal sequences in mixed-genome samples) with a new tool called MetaGNN (Prashant …

… Grigoriev from the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … external source.  The work is part of the JGI’s 1000 Fungal Genomes Project, which aims to provide genomic information … were sequenced and annotated by a collaborative team. The genome sequences and annotations are available on JGI’s …